Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00087 ATGACCTCCCTCCCCCGCCCCCGCCGCCGCATTACCCGCCCCGGCGAAGGGACCGCAGAGACGACAGGGATTTTGATCGCCCTCCCAACCGCCGCGGCGATTACTACGACCGCAACGCGTCGCCGCCGCGAGACAGAGACCGGGACAGGGACAGGGATTTCAAGCGCCGACGTAGCCCGAGCCCTCCCCATCGCGACCAGCGGTATTCTCCGGCGCCGCGGCGGTCGCCTCCGCCGTACAAGCGGACGCGGCGCGGGAGTCCCCGCGGCGGCTACGGGCCTGATGATAGCTACTTGCTGTGCTGTAGTATCTGTTTTGAAGACTTGGTTTCTTTCTCTGAGAAACAAAAGACTTGGTTCTGCATCATATTTTGTTGTTTTTTCTTTAACCACATCTTGTGATTCTGGCAGACATGGATATAATTATTATGGTGGTTATGAACGGGGAATGGGTGGAAGAGGTGGTTATGCAGATGAGAAGTCCTATGGAAGGTTTGGACCACGTTCTGCAGGGGGGTATCAAAATGGGCTTTCTGATGTAGAATCCAATCGTGGTTATGGAGACATGCCAAGTGGTGCCCAAAGGGAGGGGTTGATGTCCTATAAGCAGTTCATTCAGGAGCTTGAGGATGATATACTACCTGCTGAAGCAGAGCGTAGGTATCAAGAATACAAATCAGAGTATATCTCAACCCAAAAACGAGCTTATTTTAATGCTCATAAGGATGAGGAGTGGTTGAAAGATAAATATCATCCAACAAATTTGCTCACAGTCATTGAAAGGAGGAATGAAAATGCTCGACAGCTAGCAAAGGATTTTTTTCTTGATTTACAGAGTGGAACATTAGAACTAAATCCTGGTTTGGATGCCTCTATATCCAGTAAATCGGGGCAAGCTAGTGAGCCAAATTCAGAGGAGGAAGCAGATGCTGGAGGCAAACGAAGAAGGCATGGTAGGGGATCTAATAAAGAAAATGATTTCTCAGCTGCTCCAAAGGCTCACCCAATCAGTTCTGAACCAAGAAGGATACAGGCAGATGTTCAACAGGCTCAGGTCCTTGTCCGCAAGCTTGATGTAGAAAAAGGGATTGAAGATAATATTTTATGCAGCAGCAGCGATCACAATAAAAATGATGACAAGGCACACAGTGGATCTGTGGGCCCCATTGTAATAATACGAGGCCTAACATCTGTTAAGGGTTTAGAAGGTGTTGAGCTTCTGGATACACTTATAACTTATCTTTGGCGGATTCATGGTGTAGATTACTATGGCATGATTGAGACTAATGATGCTAAGGGCTTTAGGCATGTAAGACCGGAAGGGATGGGGCATGAAGAAATAGGGAAATCAGGGTCTGACTGGGAGAAGAAGCTTGACTTATTTTGGCAAGGAAGGTTGAATGGTCTGGATCCCTTGGAAGTAATGACTGCTAAGGAGAAGATAGATGCTGCAGCAATGGAAGTATTGGATCCATATGTTAGAAAAATTAGGGATGAAAAGTATGGATGGAAGTATGGATGTGGAGCTAAGGGCTGCACAAAGCTTTTTCATGCTGCTGAATTTGTGCATAAACACCTGAAGCTCAAACACCCAGAGCTTGTTCTGGAACAGACTACCAAAGTACGCGAGGATCTGTACTTTCAAAATTACATGAATGATCCAGATTCTCCTGGTGGGACACCCATAATGCAGCAATCTCAGAAGGACAGGCCCTTAAAGCGAAGATTAGGTCTTGAGGGCCGATTGAGAGATGATCGCGGTAACAGGCGAGACCATGATCGGAATGACAGAATGAATGGAGATAGGCCTGATAACTCTCCGTCCAATGAAAGACAGTCACTTGAGATGGGAAACCGCGATGAAACAATGTATGATTCTTATGCAGGGCCAGGTGTACCTCCATTTGCCTCAGATATACCTCCTCCACCAGTGTTGATGCCTGTTCCTGGTGCTGGGCCTTTGGGACCCTTCGTTCCTGCTCCCCCAGAAGTTGCAATGCAGATGTTAAGAGATCAAGGAGGACCATCATCATATGATGCCTCTGGAAGAAAGATGCGCGGTGGCCCTCATATGGGAGGCGCAGCACCAATAATTGCTGTTCCTCCAAACTTTAGACCAGATCCTCGGCGGATGCGAAGTTATCAAGATCTGGATGCCCCGGAGGACGAGGTCACTGTTATAGACTATCGGAGTTTGTAG 2199 0.4784 MTSLPRPRRRITRPGEGTAETTGILIALPTAAAITTTATRRRRETETGTGTGISSADVARALPIATSGILRRRGGRLRRTSGRGAGVPAAATGLMIATCCAVVSVLKTWFLSLRNKRLGSASYFVVFSLTTSCDSGRHGYNYYGGYERGMGGRGGYADEKSYGRFGPRSAGGYQNGLSDVESNRGYGDMPSGAQREGLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRAYFNAHKDEEWLKDKYHPTNLLTVIERRNENARQLAKDFFLDLQSGTLELNPGLDASISSKSGQASEPNSEEEADAGGKRRRHGRGSNKENDFSAAPKAHPISSEPRRIQADVQQAQVLVRKLDVEKGIEDNILCSSSDHNKNDDKAHSGSVGPIVIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMIETNDAKGFRHVRPEGMGHEEIGKSGSDWEKKLDLFWQGRLNGLDPLEVMTAKEKIDAAAMEVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVLEQTTKVREDLYFQNYMNDPDSPGGTPIMQQSQKDRPLKRRLGLEGRLRDDRGNRRDHDRNDRMNGDRPDNSPSNERQSLEMGNRDETMYDSYAGPGVPPFASDIPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLRDQGGPSSYDASGRKMRGGPHMGGAAPIIAVPPNFRPDPRRMRSYQDLDAPEDEVTVIDYRSL* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00087 732 MobiDBLite consensus disorder prediction 568 604 - -
Lapu11g00087 732 Pfam SERRATE/Ars2, N-terminal domain 202 283 IPR021933 -
Lapu11g00087 732 MobiDBLite consensus disorder prediction 306 323 - -
Lapu11g00087 732 MobiDBLite consensus disorder prediction 288 303 - -
Lapu11g00087 732 ProSitePatterns Zinc finger C2H2 type domain signature. 507 530 IPR013087 -
Lapu11g00087 732 Pfam Arsenite-resistance protein 2 448 631 IPR007042 -
Lapu11g00087 732 MobiDBLite consensus disorder prediction 672 717 - -
Lapu11g00087 732 MobiDBLite consensus disorder prediction 550 626 - -
Lapu11g00087 732 MobiDBLite consensus disorder prediction 553 567 - -
Lapu11g00087 732 MobiDBLite consensus disorder prediction 288 343 - -
Lapu11g00087 732 PANTHER ARSENITE-RESISTANCE PROTEIN 2 140 730 IPR039727 GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00087 Lapu-Chr11 2941900 2950733 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00087 137 732 C2H2 Transcription Factor Family AT2G27100 65.455 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00087 K27103 - gmx:100788714 1014.22