Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00085 ATGGACGTTGAGGCAGTAGATGAAGGGAAAAACAGTGATAGACCTGGTTCTGAAAATGTTGAAACTGAAAAAGGGAAGGAACAAAACATGAAAGTAAACTTGGCTGAAAGAGAAGTAAATAACCAGGATGGTGACGCTTATAGGAAACCACTTGTGGGCATGTTGTTTGAGTCTGAAGATGCTGCAAAATCATTTTATGAAGCATATGCAAGAGATATAGGATTTAGCACACATGTTGGTCAATTCAGTCGTGCTAAGCCTGATGGTCCAATTATAACTTGGGACTTTGCTTGTTCCAGGGAGGTATTTAAAAGGAAGAACATAGTAAGTTGCAATGCAATGCTTAGGGTAGAGAGAAAAGATGCAAACTGGATAGTGACTAAATTTGTTGAGGACCATAACCATTCCCTTGCTTCCTCTAGAAAGGTGCAGAACCTTCAACCCAGTAGACATTTGTTAGGTTCTGCAAGGACTGTTATAGTGACATCTGATGCCCGTAACGAATCCTGTGATTTCTTGAATGGAAATCATTTAGAGCCCATTAGTTCATGTTGGAACTCCTCTCCAGCAGAAAAATGTCATCCAATGAGAAACATCGGGTCACTTACCTATGCAAGATCTTCTCAAAAGAGGACCCTTGGAAGAGATGCTCAAAATCTTCTGAATTATTTTAAGAAGATGCAGGGAGAAAACCCTGGCTTTTATTATGCAATACAACTAGATGATGAAAACCGCATGACCAATGTATTCTGGGCTGATGCAAGGTCAAGAGCAGCTTATAATTACTTTGGTGATGCTGTAATTTTTGACACAATGTATAGACCAAATCAGTACCAAATCCCATTTGCTCCATTTACAGGATTCAATCACCATGGCCAGATGGTTTTATTTGGTTGTTCATTACTTCTAGACGAATCTGAGTCTTCTTTTACATGGCTATTCAAGACGTGGCTATCTGCTATGAATGATCGACCACCTGTTTCCATAACCACAGACCAAGATAGAGCCGTACAAGCAGCAGTTGCTCATGTGTTTCCTGAAACTCGGCACTGTATTTGTAAGTGGCACATTTTAAGAGAAGGTCAAGAAAGATTGGCTCATATTTACCTTGCTCATCCTTCATTCTATGGGGATCTATATAGCTGTATCAATTTTTCTGAGACTATTGAGGATTTTGAATCAACATGGAAATCTCTTCTGGATAAATATGATCTCCAGAAAAATGATTGGCTTCAAGCAGTCTATAATGCTCGCAAACAATGGGCCCCTGTTTACTTTCGTGATACATTCTTTGCTGCTATTACTTCAAACCACGGGGTAAACTCCTTTTTTGATGGCTATGTAAATCAACAGACAACCATACCTTTATTCTTTAGGCAGTATGAAATATCTCTTGAACATTCATTGGAAAAAGAAGTAGAAGCAGATTATGAGACTATTTGTAACACACCTGTACTGAAGACTCCATCACCAATGGAACAACAGGCAGCAAATATGTACACTAACAAGATTTTTGCAAAATTTCAGGAGGAACTGGTGGAAACTTTTGCATATACTGCAAATAATGTTGACGATGATGGTGTGATCAGCAAATACAGGGTTGCAAAATATGAAAATGATCACAAGGCATACATGGTCACATTAAATATCTCTGGAATGAAGGCAAATTGCAGCTGTCAGATGTTTGAATACTCAGGCATTCTTTGTCGGCATGTATTGACTGTTTTCACTGTTACAAATGTTCTTACCCTTCCATCACACTACATTTTGAAGCGATGGACAAGGAATGCAAAATCTGTTTCTGGAACTGATGAAAAAATAACAGATACACTTGACATTGAAAATCTCACTATACGTTTTAATAGTTTATGTCGAGAAGCCACTAAGCTTGCTGAAGAAGGGGCAATTTCTGTTGAGACATACAATGTAGCAATGAATGCTTTGAGAGAGGGTGCTAAAAGGGTAGGTATTATGAAGAAAACTATTGCAAAAGTCAAACCTCCAAACACTCAGAGTAATGGAAGCTGTCAGGAAGACAATAGCAAGAAGAGCCCTTCATCAATTTCGGATGTCATCCCATCACTATGGCCTTGGCAAGATTCAGTGTCACATCACTTCAATCATAATGACCTTGGGCTTCCTGTTACTGATCTGAATCACCCAAGTATGGCTCCTGTTTCTATTCACGGGGATGGTGGCCCTCCAGATAATTCTGTTGTCCTTATGTGTTTCAAGTCTATGACTTGGATCATCGAAAATAAGAATTCAAGCCAATCTAGTAAAATTGCAGTCATCAACATGAAGCTGCAAGATTATGGTAAGAGCCCTTTAGGAGAGACAGAAGTGCAATTCAGGGTGACAAGGGTCACATTGGAGCCTATGTTGAGGTCAATGACTTACATTAGTCAACAGTTAAATGCACCAATCAATAGAGTTGCTATCATCAATCTGAGGCTCCAGGATACGAAGACAACTACTGGGCAAACAGAGGTGAAATTCCAAGTTTCTAGAGATACTCTAGGCTCCATGCTGAGATCTATGGCCTACATCCGGGAGCAGCTGTAG 2565 0.3957 MDVEAVDEGKNSDRPGSENVETEKGKEQNMKVNLAEREVNNQDGDAYRKPLVGMLFESEDAAKSFYEAYARDIGFSTHVGQFSRAKPDGPIITWDFACSREVFKRKNIVSCNAMLRVERKDANWIVTKFVEDHNHSLASSRKVQNLQPSRHLLGSARTVIVTSDARNESCDFLNGNHLEPISSCWNSSPAEKCHPMRNIGSLTYARSSQKRTLGRDAQNLLNYFKKMQGENPGFYYAIQLDDENRMTNVFWADARSRAAYNYFGDAVIFDTMYRPNQYQIPFAPFTGFNHHGQMVLFGCSLLLDESESSFTWLFKTWLSAMNDRPPVSITTDQDRAVQAAVAHVFPETRHCICKWHILREGQERLAHIYLAHPSFYGDLYSCINFSETIEDFESTWKSLLDKYDLQKNDWLQAVYNARKQWAPVYFRDTFFAAITSNHGVNSFFDGYVNQQTTIPLFFRQYEISLEHSLEKEVEADYETICNTPVLKTPSPMEQQAANMYTNKIFAKFQEELVETFAYTANNVDDDGVISKYRVAKYENDHKAYMVTLNISGMKANCSCQMFEYSGILCRHVLTVFTVTNVLTLPSHYILKRWTRNAKSVSGTDEKITDTLDIENLTIRFNSLCREATKLAEEGAISVETYNVAMNALREGAKRVGIMKKTIAKVKPPNTQSNGSCQEDNSKKSPSSISDVIPSLWPWQDSVSHHFNHNDLGLPVTDLNHPSMAPVSIHGDGGPPDNSVVLMCFKSMTWIIENKNSSQSSKIAVINMKLQDYGKSPLGETEVQFRVTRVTLEPMLRSMTYISQQLNAPINRVAIINLRLQDTKTTTGQTEVKFQVSRDTLGSMLRSMAYIREQL* 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00085 854 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 36 655 IPR031052 GO:0006355
Lapu11g00085 854 Pfam SWIM zinc finger 532 578 IPR007527 GO:0008270
Lapu11g00085 854 MobiDBLite consensus disorder prediction 1 32 - -
Lapu11g00085 854 Pfam FAR1 DNA-binding domain 64 138 IPR004330 -
Lapu11g00085 854 SMART 26again6 555 582 IPR006564 GO:0008270
Lapu11g00085 854 ProSiteProfiles Zinc finger SWIM-type profile. 544 580 IPR007527 GO:0008270
Lapu11g00085 854 MobiDBLite consensus disorder prediction 665 688 - -
Lapu11g00085 854 Pfam MULE transposase domain 267 359 IPR018289 -
Lapu11g00085 854 Coils Coil 613 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00085 Lapu-Chr11 2924239 2933391 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lapu11g00085 MULE 1.9e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00085 - - gmx:100789242 1573.53