Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00074 ATGGCACCAAAACCAGTTTCCCTTTCACATTTACTCCTTTTAATCTTGTTTCTTGAAACCATCCAACTTTCAGAGCAGTTAGAATTTTCTCAGTCTCAAACACTTCTCAAGGTTCAGCAACTTCTGGGCTATCCATCAGCATTAAGTACCCTCAGCAGCACCTCAGACTTTTGCAATATCGAACCTACCCCATATTTGACACTAGTCTGCTATGAGGATAGCTTGACACAGCTGCATGTTGTTGGCAACAATGAGTATTCTTCACTGCCTCCAAACTTCTCCTCGGATACTCTATTTACTATACTAGGCTCTCTATCAAGCTTGAAAGTCCTCTCTCTGGTTTCTCTTGGACTATGGGGGCCCATACCTGAAAGCATTGCACAAATGTCTTCATTGGAAATACTTAACATTAGCTCAAACCACTTCAATGGAGCTATTCCATCTCAACTTTCACTTCTGACGAACCTGCAGTCAGTGGTGCTTGATGATAACGACATCAACGGTGAAATTCCTAACTGGGTAGGCTCACTTCAAGGTTTGGCTGTGCTTAGTATGAAGAAAAACTGGCTTAGTGGGAGCCTTCCAACTTCATTGGATGCTCTTCGGACCTTGAGGGTGTTAGATCTATCAAGTAATCAGTTATCTGGGGAACTTCCTCATCTTAAGAATTTGGCAAACCTTCAAGTTCTTAACTTGGAAAACAACACATTTGGACCTCATTTTCCTTCACTCCCCACCAAGTTAGTTTCTCTTGTGCTCAGAAATAACAGTTTCAGGCTAGGTGTCCCTTCTGGTTTAAGCTCTTTCTATCTGCTCCAAAGGCTAGACCTTTCATTGAATGGCTTTGTGGGGCCATTTCCATCATCCTTATTGTCACTGCCTTCCATAAATTACCTTGATATTTCCTCAAATAAATTCACTGGAATGCTTTTCAATAACATGTCATGCAATGATGATCTCCATTTTGTAAATTTGTCTTCAAATCTTCTGAAAGGGGAAATTCCTGCTTGTTTGGAACCAAAGACCAGGATTGTTCTTTATGCTAGAAACTGCTTATCAAATAAGAACCAAGATCAGCACCCTTCAGATTTCTGCAGCAATGAGGCTTTGGCAGTGAAAATCATACCCCAGCAACCGAAGCACAAGAGAACAACTGGTAAAGCAGTTATTGTATCAAGTATGGGAAGTGTTGTTGGTGTAGTGTTGATTCTAGGAGTGGTTATCTTGGTTGTTAGCCGAGTTCATAAGAAACAAGTGGAGAAAATACCTTCAAAGTCGCCTTCGGAAAATGTTACCAGCCAGGTACATAATAAAGATGAAGTGAAAACTACTACAAGGTCCATAATGGAGCATATCATCAAAAGGGTTCCTGACAAACGTGCTGTGGAAACACTGACAAGATCCATAAAAGAGCATGTGATGAGCCGAGTGAATAATAAGCGGGTTGTGAGGGCATCGACAAGGTCCATAATAGAACACGTATCATCAGTTAACACAGCAAAACTACTCACAGATGCAAGATATATATCAGAAACAATGAAGATGGGGGCAAGCCTTCCTGCTTATAGGACCTTTGCTTTGGATGAACTCAAGGAAGCTACAAATAATTTCGATGCATCGCGTTTCATAAGTGAAGGCCCACGTGGTCAGATTTATAAAGGGGTTCTCTCTGATGGGATGCACATTGCTATTAGAGGTTTGAAAATGAGGAAGAAACATGGCCCTCAAACTTACATGCACCATGTTGAGATGATTTCAAAACTAAGGCATTCACATTTGGTTAGTGCTCTTGGGCATGCTTTCGAGTGCAATCAGGATGATTCATGTGTGAACAATGTATTTCTCATATTTGAGTTTGTTCCAAATAGAAGTTTAAGAAGCTGCGTTTCAGGATCTTCTGGGGAAAAGATTTCATGGACTCAGAGAATAACAGCTGCAATTGGAGTGGTGAAAGGCATTCAATTTTTGCACACAGGGATAGTGCCTGGACTATATTCAAATAATCTCAAGATTACAGATATTCTTTTGGATAACAATCACATTGTTAAAATAAGCAGCTACAATCTGCCACTCTCTGCTGAAAATAAAAAAATGATCAGCAGTGGAACTTCCCCTGGACTCAAAGGAAATGTCCAAGCAAGGATAAAGGGTGAAGACAAGAATGATGTCTATGATATTGGGGTAATCTTGCTAGAAATCATTCTGGGCCGACCAATAATGTTCCACAATGAAGTTGGAACACTAAAAGATCTTTTACGGGTAAGCATCAAAACTGATGACATAGCTAGAAGGAGTATTGTTGATCCAGCAGTTCACAAGGAATGCTCAGATGAATCATTAATGACAATGATGGAGATATGTGTAAGGTGTGTCTCTGATGACCCAACTGAAAGGCCTTCTGTGGAAGATATTCTCTGGAACTTGCAGTTTGCATCACAAGTTCAGAATTCATGGAGAAGAGATTCAAGTGATCACAGTTCCTCTCCTGCACCATCTTCCAGGGACACATAG 2511 0.4066 MAPKPVSLSHLLLLILFLETIQLSEQLEFSQSQTLLKVQQLLGYPSALSTLSSTSDFCNIEPTPYLTLVCYEDSLTQLHVVGNNEYSSLPPNFSSDTLFTILGSLSSLKVLSLVSLGLWGPIPESIAQMSSLEILNISSNHFNGAIPSQLSLLTNLQSVVLDDNDINGEIPNWVGSLQGLAVLSMKKNWLSGSLPTSLDALRTLRVLDLSSNQLSGELPHLKNLANLQVLNLENNTFGPHFPSLPTKLVSLVLRNNSFRLGVPSGLSSFYLLQRLDLSLNGFVGPFPSSLLSLPSINYLDISSNKFTGMLFNNMSCNDDLHFVNLSSNLLKGEIPACLEPKTRIVLYARNCLSNKNQDQHPSDFCSNEALAVKIIPQQPKHKRTTGKAVIVSSMGSVVGVVLILGVVILVVSRVHKKQVEKIPSKSPSENVTSQVHNKDEVKTTTRSIMEHIIKRVPDKRAVETLTRSIKEHVMSRVNNKRVVRASTRSIIEHVSSVNTAKLLTDARYISETMKMGASLPAYRTFALDELKEATNNFDASRFISEGPRGQIYKGVLSDGMHIAIRGLKMRKKHGPQTYMHHVEMISKLRHSHLVSALGHAFECNQDDSCVNNVFLIFEFVPNRSLRSCVSGSSGEKISWTQRITAAIGVVKGIQFLHTGIVPGLYSNNLKITDILLDNNHIVKISSYNLPLSAENKKMISSGTSPGLKGNVQARIKGEDKNDVYDIGVILLEIILGRPIMFHNEVGTLKDLLRVSIKTDDIARRSIVDPAVHKECSDESLMTMMEICVRCVSDDPTERPSVEDILWNLQFASQVQNSWRRDSSDHSSSPAPSSRDT* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00074 836 Pfam Protein kinase domain 541 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00074 836 Gene3D Ribonuclease Inhibitor 245 359 IPR032675 -
Lapu11g00074 836 ProSiteProfiles Protein kinase domain profile. 537 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00074 836 Gene3D Phosphorylase Kinase; domain 1 497 619 - -
Lapu11g00074 836 Gene3D Transferase(Phosphotransferase) domain 1 620 829 - -
Lapu11g00074 836 FunFam probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 30 150 - -
Lapu11g00074 836 ProSiteProfiles Leucine-rich repeat profile. 203 225 IPR001611 GO:0005515
Lapu11g00074 836 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 74 808 - -
Lapu11g00074 836 SUPERFAMILY Protein kinase-like (PK-like) 516 811 IPR011009 -
Lapu11g00074 836 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 511 619 - -
Lapu11g00074 836 Gene3D Ribonuclease Inhibitor 30 151 IPR032675 -
Lapu11g00074 836 MobiDBLite consensus disorder prediction 815 836 - -
Lapu11g00074 836 Pfam Leucine rich repeat 154 214 IPR001611 GO:0005515
Lapu11g00074 836 FunFam probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 151 244 - -
Lapu11g00074 836 Gene3D Ribonuclease Inhibitor 152 244 IPR032675 -
Lapu11g00074 836 FunFam Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 246 370 - -
Lapu11g00074 836 SUPERFAMILY RNI-like 71 342 - -
Lapu11g00074 836 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 620 824 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00074 Lapu-Chr11 2375450 2381186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00074 44 833 Miscellaneous Gene Families AT3G03770 51.815 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lapu11g00074 Pkinase 3.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00074 - - gmx:100797327 1377.84