Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00045 ATGGCTTCGGAGAAGAAACTATCCAACCCAATGCGGGAAATCAAGGTCCAGAAACTCGTCCTCAACATATCCGTCGGTGAGAGTGGCGATCGTCTCACCAGAGCCGCAAAGGTGCTGGAGCAGCTTAGTGGCCAAACCCCAGTGTTTTCAAAAGCAAGATACACTGTCCGTTCTTTTGGTATCAGAAGAAATGAAAAGATTGCATGCTATGTCACTGTTAGAGGTGACAAGGCAATGCAGCTTCTGGAGAGTGGCTTGAAGGTGAAGGAATATGAACTTCTGAGAAGAAACTTCAGTGATACTGGGTGCTTTGGCTTTGGCATTCAGGAGCATATTGACTTGGGAATCAAGTATGATCCCTCTACTGGTATTTATGGGATGGATTTCTTTGTTGTTTTGGAGCGCCCTGGCTATCGTGTTGGCCGTCGTCGCCGATGCAAGTCCCGAGTTGGGATCCAGCATCGTGTTACAAAGGAGGATGCTATGAAGTGGTTCCAGTTTAGAGACTGTGGTTTTGTTATTGCATTTGGCCTTCTGAGGAATATATAA 549 0.4645 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQFRDCGFVIAFGLLRNI* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00045 182 Gene3D - 2 176 IPR022803 -
Lapu11g00045 182 Pfam ribosomal L5P family C-terminus 66 164 IPR031309 -
Lapu11g00045 182 ProSitePatterns Ribosomal protein L5 signature. 39 55 IPR020929 GO:0003735|GO:0005840|GO:0006412
Lapu11g00045 182 PIRSF RPL5p_RPL5a_RPL11e_RPL5o 1 170 IPR002132 GO:0003735|GO:0005840|GO:0006412
Lapu11g00045 182 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 2 168 IPR002132 GO:0003735|GO:0005840|GO:0006412
Lapu11g00045 182 FunFam 60S ribosomal protein L11 2 174 - -
Lapu11g00045 182 Pfam Ribosomal protein L5 9 62 IPR031310 -
Lapu11g00045 182 SUPERFAMILY RL5-like 8 166 IPR022803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00045 Lapu-Chr11 1895335 1898613 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00045 1 174 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 91.954 1.33e-119 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00045 K02868 - mus:103987044 317.775