Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00017 ATGTTGTTGCTGTGTACTGTGCAGATTGTGGAGCAAAGTCCGTGTGGTTTCGTTGCTGCTGGAACAGATGAAGATATGGTCTCTTTCTTTCTTACCCGTTTCACGAAGAGTTCGTACTTGAAGAGGCAGGAAAAGAGCGATGTCCACGTCGACGAGGGCAGAAGCAGAAGGAGCCCATGTTTGGACAAACATGTTCTGCTGTTTCCACCTGCCTCTGAATCAACTGGTGCTATAGGGGCTTGGGAGCATTTTAAAGTGGGTTTATTTCATGAAATTGACCACTCCAGGCTCTCACCAATTTCCCCGGTGCAACTAAATTCTGTTCGCATTGTAATGGTCAGTGACATAGGGGAGCACCTGGTGTCGCTAAGGTACCCAAGCCTCCAATCACTTCGCCTGCACTTCAGCGACCAAAACTTCGGCAAAGCAGAGGGGAAGACGATCCCTGCACTCGACGAGAAGTACGTGATGGGGATGGACTTCGCCATCAAAGCGCTTTCCAGGAGCATCCCAACTGAGGAATTCGCTCAAAGAAGAAACTCTTGGAGCTTCTGGGTCTCTCCTAAAGAAAATACTCAAGACTCCGACAATCCAGCTCTCATTGATGCCGCAAGGAACCTCATTTCCAAGCAGGGTTCTTGCTGGACTCAGCTCAAGTTCACAGGGATGATGCAGTGGGGCAAACGCCGGCAAGTTCGGTTCTTGGGCCGTCATGAAGAGCCAAAGGTTGAATCTTTACCGGAACTGTGTAAGGGAAGAATGGTTAGTGTTGAACTAAGAGAAGGAACCAGTGAAAAGAAAAGGAAGAAAGGCGAAGAGGAAATGGAGGCTACCAAGGCAGAGTCTTTCGGGGATATGAGGTTGACTCGTCAATGTAGGCAAAATCATCAAAATGTGAGTAACAGTGGAGATAAAAAGTTTAAGAAAGCAAAGAATGATCCCAAGAAGCAGCAACTCGTGCTTTACAACAAAAACAAGCGGAAAATCTCTATTGGAAGATGGTCTGCTGAGAGGTATATGCTGGCAGAGGAGAACATGTTAAAGGTTATGAAAGAAAAAAGAGCTGTGTATGGGAACCCAATATTGAGGCCAGATTTGAGATCAGAAGCACGAAAGTACATTGGTGATACGGGTCTGCTAGATCATTTGCTGAAGCACATGGCTGGAAAAGTGGCACCCGGAGGAACTGAGAGATTTCGACGGCGTCACAATGCTGAGGGCGCAATGGAATACTGGTTAGAGAATGCTGATCTTGTTGAAATGAGGAAGGAAGCAGGGGTACAAGACCCTTACTGGACTCCTTCCCCTGGATGGAAGCTTGGGGACAGCATTTCACAAGATTACGTTACTGGTAGTGAACTCAGAGAAATCAAAGAAGAAATCCTCAAATTGAAACAAGATATGCGAGAGCTCGCATCGAAGAAGGGAGAGGACGCATTGGCCATTGTAACTACTCCAAGCTCATGTTTGTCTAGTTTGAATTCGGAGGACTATGGTTCCTTCGCTCCAAAGGAGGAGATTTATGCGGAGTTGGTGAGTAAGAAGTCTAAAATAGAGGAACAATTGAAGGAAATTTCACTGACTCTGACTTGTATGGAGGAGAAACTTAGAATGCTAAAACCAACAATGGTAGAGGAACAAATAATGTCAGAATCCGAAACACCCCAAGCCCTTTTTCCCGGACCAACATCAGAAAACATAGGAGGGGAGACAAGGAAGGAAAAGAAAAACTACAAGAACAAATCAACAAACTCAGCGGATACACAGATGCAGAAAAACAGCAGTGCAGCGGAGGACAAGACAGCAAAGATTGAAAGGCTGAAAAGTGGTTTCCAAATTTGCAAACCTCACGGAACCTTTGTGTGGCCAAATATAGGTCTGTCTCCCCTTGTGGCCAACCATGATGACCACACTGTGGCCCCTACGCCACCGTCAGCATCCTCTTCTACCACCTCAGCCCCAAAGCTCATTTTCAAACCCCAGCCTCAGCACCCACCATTACAAATCCTAACCCATCCTTCTTCCCCTGTGAAGCCACTTGCAGAGAGGCGACCTGTCAGCACAGCTACTTTGACCCATGTTACTGCCCCATTCTCCCCTCGCCTTTCTCCACCATCAGGGACTCCAATATCCAAAATCACCACCACCATCACTATCAACCTCAACGAGGCCCCTCTCACCCTAGAGTAG 2190 0.4708 MLLLCTVQIVEQSPCGFVAAGTDEDMVSFFLTRFTKSSYLKRQEKSDVHVDEGRSRRSPCLDKHVLLFPPASESTGAIGAWEHFKVGLFHEIDHSRLSPISPVQLNSVRIVMVSDIGEHLVSLRYPSLQSLRLHFSDQNFGKAEGKTIPALDEKYVMGMDFAIKALSRSIPTEEFAQRRNSWSFWVSPKENTQDSDNPALIDAARNLISKQGSCWTQLKFTGMMQWGKRRQVRFLGRHEEPKVESLPELCKGRMVSVELREGTSEKKRKKGEEEMEATKAESFGDMRLTRQCRQNHQNVSNSGDKKFKKAKNDPKKQQLVLYNKNKRKISIGRWSAERYMLAEENMLKVMKEKRAVYGNPILRPDLRSEARKYIGDTGLLDHLLKHMAGKVAPGGTERFRRRHNAEGAMEYWLENADLVEMRKEAGVQDPYWTPSPGWKLGDSISQDYVTGSELREIKEEILKLKQDMRELASKKGEDALAIVTTPSSCLSSLNSEDYGSFAPKEEIYAELVSKKSKIEEQLKEISLTLTCMEEKLRMLKPTMVEEQIMSESETPQALFPGPTSENIGGETRKEKKNYKNKSTNSADTQMQKNSSAAEDKTAKIERLKSGFQICKPHGTFVWPNIGLSPLVANHDDHTVAPTPPSASSSTTSAPKLIFKPQPQHPPLQILTHPSSPVKPLAERRPVSTATLTHVTAPFSPRLSPPSGTPISKITTTITINLNEAPLTLE* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00017 729 MobiDBLite consensus disorder prediction 582 597 - -
Lapu11g00017 729 MobiDBLite consensus disorder prediction 551 600 - -
Lapu11g00017 729 MobiDBLite consensus disorder prediction 260 286 - -
Lapu11g00017 729 Coils Coil 508 535 - -
Lapu11g00017 729 Coils Coil 454 474 - -
Lapu11g00017 729 MobiDBLite consensus disorder prediction 260 283 - -
Lapu11g00017 729 PANTHER PROTEIN DYAD 82 694 IPR044221 GO:0007131|GO:0051177|GO:0051321
Lapu11g00017 729 MobiDBLite consensus disorder prediction 295 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00017 Lapu-Chr11 707865 711623 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00017 333 415 PHD Transcription Factor Family AT5G22260 41.860 5.55e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00017 - - var:108339226 1240.33