LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu11g00011	ATGCCTTCAAATCATAATCCTTCAACCACCTCATCAAGAGCAATAGCAGAAACTACAAGAGAGTTTCCTGTACCTGCAGGAAACAACACCATTCAAGGTCAAAGAAGTGGAACTAGCTCTCGTAGTGATAGTTTAGAGAGCAGTAGTAATGCACATATTAAGCCACACACTGGAGGTGATGTGAGGTGGGATGCAATTAACATGGTTGCTAAGGGTAATGGTCTTAATCTTAGTCATTTCAGGCTTCTGAAGCGTGTTGGATATGGTGATATTGGAAGTGTGTACCTTGTGGAACTTAAAGGAAGTAAGGCCTTCTTTGCCATGAAAGTAATGGATAAGGCATCACTTGCTAGTAGAAACAAGCTTTTGAGAGCACAAACAGAAAGAGAGATTCTTGGACTTCTCGACCACCCTTTTCTACCAACTTTATATTCTTATTTTGAGACTGATAAATACTATTGTTTAGTCATGGAGTTTTGCAGTAGTGGAAATTTGCATTCTCTGAGACTCAAGCAACCTAACAAGCATTTCAGTGAAGAAGCTACACGGTTTTACTGTTCAGAAATTTTGTTAGCTTTGGAATACTTGCACATGTTAGGCATTGTGTATAGAGACTTAAAACCAGAAAATGTTCTGGTTCGAGATGAAGGTCACATAATGTTATCAGATTTTGACTTATCTCTTCGATGCTCTGTGAATCCTACCTTAGTGAAGTCATCATCTGCACATGAAAGTAGTAATGGTCCTTCTGGGGGCATTTTATATGATGAACAAGCAGTACATGGTTGCATACAACCCTCAAGTTTCTTCCCACGCATTTTGCCTTCAAAAAAGAATCACAAGTCAAAGTCAGATTGTGGCCTCATGGTTGGAGGGTGCCTCCCTGAACTAATGGCTGAGCCTACAAATGTGAGGTCAATGTCCTTTGTGGGGACACATGAGTATCTTGCTCCAGAGATTATTCGTGGTGAAGGACATGGTAGTGCAGTGGATTGGTGGACCTTTGGAATCTTCTTGTATGAGCTTCTGCTTGGGATAACACCCTTTAAAGGTGCTGGAAATAAAGCTACCCTCTTCAATGTTGTAGGACAACCCTTAAGGTTTCCAGACAAACCCATTGTTAGCAAAGTTGCAAGAGACCTTATACAAGGGTTGTTGGTGAAAGAGCCCCAGAAAAGGTATGCTTATAAGAGAGGTGCCACAGAAATAAAGCAACACCCTTTCTTCAATGGAGTGAATTGGGCTCTTGTTAGAAGTGCTACACCTCCTATTATACCAGAAACTATAGATTTTTCTAAGTATGCTAAAAAAGCAAATGGTCCACCAATGGATAAGAAGATTGCAGATATTGTTGCAAGTGATAAAGGTAAGCATACACATCCAGATTCATCTTATGAAGATTTTGAGTACTTCTAA	1416	0.4011	MPSNHNPSTTSSRAIAETTREFPVPAGNNTIQGQRSGTSSRSDSLESSSNAHIKPHTGGDVRWDAINMVAKGNGLNLSHFRLLKRVGYGDIGSVYLVELKGSKAFFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKYYCLVMEFCSSGNLHSLRLKQPNKHFSEEATRFYCSEILLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVNPTLVKSSSAHESSNGPSGGILYDEQAVHGCIQPSSFFPRILPSKKNHKSKSDCGLMVGGCLPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLLGITPFKGAGNKATLFNVVGQPLRFPDKPIVSKVARDLIQGLLVKEPQKRYAYKRGATEIKQHPFFNGVNWALVRSATPPIIPETIDFSKYAKKANGPPMDKKIADIVASDKGKHTHPDSSYEDFEYF*	472

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu11g00011	471	Gene3D	Phosphorylase Kinase; domain 1	78	163	-	-
	Lapu11g00011	471	Gene3D	Transferase(Phosphotransferase) domain 1	303	427	-	-
	Lapu11g00011	471	ProSiteProfiles	Protein kinase domain profile.	80	409	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu11g00011	471	MobiDBLite	consensus disorder prediction	1	56	-	-
	Lapu11g00011	471	FunFam	Serine/threonine-protein kinase D6PK-like	78	163	-	-
	Lapu11g00011	471	SUPERFAMILY	Protein kinase-like (PK-like)	77	429	IPR011009	-
	Lapu11g00011	471	CDD	STKc_phototropin_like	78	430	-	-
	Lapu11g00011	471	MobiDBLite	consensus disorder prediction	1	54	-	-
	Lapu11g00011	471	FunFam	serine/threonine-protein kinase D6PK-like	164	231	-	-
	Lapu11g00011	471	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	201	213	IPR008271	GO:0004672\|GO:0006468
	Lapu11g00011	471	SMART	serkin_6	80	409	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu11g00011	471	Pfam	Protein kinase domain	81	233	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu11g00011	471	Pfam	Protein kinase domain	306	409	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu11g00011	471	Gene3D	Transferase(Phosphotransferase) domain 1	164	233	-	-
	Lapu11g00011	471	FunFam	Serine/threonine-protein kinase AGC1-7	302	427	-	-
	Lapu11g00011	471	PANTHER	FLIPPASE KINASE 1-RELATED	30	435	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu11g00011	Lapu-Chr11	573041	575235	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu11g00011	45	437	AGC Kinase Gene Family	AT1G79250	76.692	0.0	634

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Lapu11g00011		Pkinase	4e-36	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu11g00011	-		-	gmx:100802478	838.95