Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01537 ATGGTCAAATTGCGTCCCCAGCAATTCAGAAAGCAGAATTACATTCAATTCAGCCTTGGAAGGCTTCGTATATACATACATGACCATGCAAGTTTACTAGTTACGGCCTTCTACATGATGACTGAGCTACCATCCGTGATTGGTGGCACCATGCCTCCTTCTTCTATTTCTTCATCCATTAATCATGAACGAGAGGCTTTGCTCCACAACGGTTGGTGGAATGATCACCCAAAAACCTTAGACCATTGTCATTGGAAGAGTATCTCTTGCAATGAAGCTGGAAGTGTTACTCATATTGACAGTTCATTGTTGAATATTAGTCTATCAAAAGAATTGCTTTGGATTCAGAACTTGAATGTGACTGTCTTCCCCAATTTATTGACTCTGTTTCTAAGTGGAATGGGTCTTAGAGGAAGCACCCCCATAGAGATAGGCACACTTACAAACCTTACCGTTCTGGACTTGTCCTACAATAGTCTCCAAGACATTATTGAAGCAACTGAGGACTTTAACATCATGTGCTACATTGGGACAGGAGCATACGGTAGTGTCTATAGAGCTCAATTGAAGAGTGGAAAAATTGTTGCATTGAAGAAACTTCATCGAATAGAATCTCGAAATCCATCATTTGAAAATAGTTTTTGCAATGAAGTGAAGATGTTAACAGAAATTCGTCACAAAAATATTGTAAAACTTCATGACTTTTGTCTCCATAATCGGTGCATGTTTCTAGTCTACTGGTACATGGAAAGAAGAAGCTTATTTTATGTCTTGAATCACGATGTGGAAGCTACGGAGTTAGATTGGAGTAAAAGGATGAATATCATAAAAGGAATGGCACATGCTTTGTCCTACATGCATCATGATTTCAACCTTCCAATTGTTCAACGAGATGTAACAAGTAGCAATGTTCTACTAAACTCCAAATTTGAGGCTTTTGTCTCGGACTTTGGCACAGCTAAACTCCTTGATCCTGATTCTTCAAATCAAACCTTGGTAGTTGGAACATATGGCTACATTGCCCCAGAGTTTGCCTATACATTAACTGTCATGGAAAAATACGATATTTACAGTTTTGGAGTGGTGGCTCTGGAAACATTAATTGGAAAGCGTCCTGGCGAGTTAATTTCATCTTTATCAAACTTAGCTACTCAAAATATGTTGTTGAAGGATATCTTATATTCCCGTCTTCCTCTTCCTAATTATAGAAATGATGTTCAAGATATTATGCTTACAATAACAATAGCATTTAGATGTTTGCATTCCAAACCAAAATTCAGGCCGTCAATGCAAGAAGTGGTTGGAAAGTTCTGCAATTTGAACTCATTCTCTTTACCTTTCAATGAAATTTTGATTCCTCAATTGTTTTAA 1371 0.3764 MVKLRPQQFRKQNYIQFSLGRLRIYIHDHASLLVTAFYMMTELPSVIGGTMPPSSISSSINHEREALLHNGWWNDHPKTLDHCHWKSISCNEAGSVTHIDSSLLNISLSKELLWIQNLNVTVFPNLLTLFLSGMGLRGSTPIEIGTLTNLTVLDLSYNSLQDIIEATEDFNIMCYIGTGAYGSVYRAQLKSGKIVALKKLHRIESRNPSFENSFCNEVKMLTEIRHKNIVKLHDFCLHNRCMFLVYWYMERRSLFYVLNHDVEATELDWSKRMNIIKGMAHALSYMHHDFNLPIVQRDVTSSNVLLNSKFEAFVSDFGTAKLLDPDSSNQTLVVGTYGYIAPEFAYTLTVMEKYDIYSFGVVALETLIGKRPGELISSLSNLATQNMLLKDILYSRLPLPNYRNDVQDIMLTITIAFRCLHSKPKFRPSMQEVVGKFCNLNSFSLPFNEILIPQLF* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01537 456 FunFam Os07g0541700 protein 249 336 - -
Lapu10g01537 456 Gene3D Ribonuclease Inhibitor 54 170 IPR032675 -
Lapu10g01537 456 Gene3D Phosphorylase Kinase; domain 1 171 249 - -
Lapu10g01537 456 SUPERFAMILY L domain-like 71 164 - -
Lapu10g01537 456 ProSitePatterns Protein kinases ATP-binding region signature. 176 198 IPR017441 GO:0005524
Lapu10g01537 456 Pfam Protein kinase domain 175 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01537 456 SUPERFAMILY Protein kinase-like (PK-like) 153 434 IPR011009 -
Lapu10g01537 456 FunFam Leucine-rich repeat receptor protein kinase MSP1 146 248 - -
Lapu10g01537 456 ProSiteProfiles Protein kinase domain profile. 170 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01537 456 Gene3D Transferase(Phosphotransferase) domain 1 250 445 - -
Lapu10g01537 456 ProSiteProfiles Leucine-rich repeat profile. 149 170 IPR001611 GO:0005515
Lapu10g01537 456 PANTHER LEUCINE RICH REPEAT KINASE 2 160 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01537 Lapu-Chr10 26751078 26753772 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01537 161 342 Receptor kinase-like Gene Family AT4G08850 56.757 4.81e-62 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu10g01537 Pkinase 1.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01537 - - gmx:102667972 445.277