LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu10g01533	ATGGTGGATCCAGAACCTCATAGGTGTAGAAGAACTGATGGAAAGAAATGGAGGTGCAGTAAGAGTATAGTTCCTGGTCAAAAGTACTGTGAAAGACACATGCATAGAGGTCGAAATCGTTCAAGAAAGCCTGTGGAAACATCTCAAGTTAAGTCCCAAGTTAAGTCCCGTTTGGCAACAAAAAATTCTACCAAGTCACCTACCAAATCAGCCTCAAAGACAGTTTTTGAAATTTCAAATCCAAACCTTATGGCCATTCAACCTAACACGCCTTCCAGCACCCCGCCAAGGAGCCTCAGCATTGACAATTGCTTTTCTATGAATAGGTCTAAAAATATGGCCAGGGCTGCCAACGACCTGGAGGTGTTTTCTTCCACCGCAGTGTCCCCTGGCTCAGCTCTTACCGCTGCAGTTGCTCCTAAGGTGGTGCCGACATGCAGCAGTGTGACATCTGTTGCTTTGGATAACAAAAGTTGTCTGAAGATATGTCACAAAGATAACCAGTTCAAGAACTGTGTCATTAACAACATATGCCATAGAAGTGATGGGAAAGGAAGTGGTGAATCAAATGGCATCTCCACTGGAATAAGCTTCTCTCCAACGAGTGTTCTTCAAGTTTTTGGTAACAGTCCTTCTTACCTCCATGACAAAGCCAACATAGAACCTGCACCCGATCGGTGTCGGAGAACAGACGGCAAGAAGTGGCAATGCAAGAGTGCTGTTCTTCCTGGTCAGAAATACTGTGCCACACACATGCACAGAGGTGCTAAAAAGCGTTTTGCAAACCATGAAATAGCAGCAGCCACTAGTACTTGTTCTGCAGTTACCAACCATGAAATAGCAGCTGCAGCTACTACTGCTACTTGTTCTGCCGTTACCATTGTCCGGGTGCCTTACTCTCCAGCCACAACCAACATGCAGAAAGCTCATTCTGCAATTCTAAGTACAAATCTTTCTATGTCTGTCCCAGCAAGTGCTCCTTTCATACAATGCAATGAGAAAGGTCCAAGTAACAGTGACACCGATACCACCATCAGTGACACCTTGCAAGAGTGTAGCTATTCCTCTTTCTGA	1074	0.4507	MVDPEPHRCRRTDGKKWRCSKSIVPGQKYCERHMHRGRNRSRKPVETSQVKSQVKSRLATKNSTKSPTKSASKTVFEISNPNLMAIQPNTPSSTPPRSLSIDNCFSMNRSKNMARAANDLEVFSSTAVSPGSALTAAVAPKVVPTCSSVTSVALDNKSCLKICHKDNQFKNCVINNICHRSDGKGSGESNGISTGISFSPTSVLQVFGNSPSYLHDKANIEPAPDRCRRTDGKKWQCKSAVLPGQKYCATHMHRGAKKRFANHEIAAATSTCSAVTNHEIAAAATTATCSAVTIVRVPYSPATTNMQKAHSAILSTNLSMSVPASAPFIQCNEKGPSNSDTDTTISDTLQECSYSSF*	358

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu10g01533	357	MobiDBLite	consensus disorder prediction	46	72	-	-
	Lapu10g01533	357	ProSiteProfiles	WRC domain profile.	221	266	IPR014977	-
	Lapu10g01533	357	PANTHER	GROWTH-REGULATING FACTOR 5	207	312	IPR031137	GO:0005634\|GO:0006351\|GO:0032502
	Lapu10g01533	357	Pfam	WRC	4	46	IPR014977	-
	Lapu10g01533	357	Pfam	WRC	223	259	IPR014977	-
	Lapu10g01533	357	ProSiteProfiles	WRC domain profile.	3	47	IPR014977	-
	Lapu10g01533	357	MobiDBLite	consensus disorder prediction	28	72	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu10g01533	Lapu-Chr10	26536496	26540258	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu10g01533	2	259	GRF Transcription Factor Family	AT2G45480	34.799	1.13e-34	130