Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01525 ATGGATTATGGAGGAAAGATTGGTGGAAGTGAAAGAGGTGGGCCTTGTGGTGCCTGCAAGTTTCTGAGGAGAAAGTGTGTGAAGGGTTGCATATTTGCACCATACTTTGACTCAGACCAAGGAACTGCACATTTTGCTGCAGTGCACAAGGTCATGAACTTGCAGGCTGAGTTAACCTATGTCCAAGCCCGTTTGGCAACAATGCAGCGCATGCCAATGGCAGTAGCTCCTCTTCCACACCCTCAAAGCTCTTCACCAACTCTTCCCTCCTCAGATCATTTTGCATCAAATGTTGACATGCAAAGTGTCCCCATTATGCACTATGATCCTCTTCAACCACATTCAGCATCATTAGAGTTAAGCAGCATCCTTTTCAATCAATCAGATCAACAACTGGAGGATAGGGAACTCCAAGCTTTGGCTCGAGAATTTGTGACCAAATACTTGCCCGGAGTAAGATTCCAGCAATCTAACTCTCCC 480 0.4604 MDYGGKIGGSERGGPCGACKFLRRKCVKGCIFAPYFDSDQGTAHFAAVHKVMNLQAELTYVQARLATMQRMPMAVAPLPHPQSSSPTLPSSDHFASNVDMQSVPIMHYDPLQPHSASLELSSILFNQSDQQLEDRELQALAREFVTKYLPGVRFQQSNSP 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01525 160 PANTHER LOB DOMAIN CONTAINING PROTEIN 12 51 - -
Lapu10g01525 160 ProSiteProfiles LOB domain profile. 14 118 IPR004883 -
Lapu10g01525 160 Pfam Lateral organ boundaries (LOB) domain 15 62 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01525 Lapu-Chr10 26304712 26308652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01525 13 158 AS2 family AT4G00210 34.722 3.67e-29 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu10g01525 LOB 2.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01525 - - gmx:100791377 258.07