Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01521 ATGGGCGAAAACTCGAAACGACAGTGGTCCCTCAGCGACTTCGAGATTGGAAAGCCTCTCGGAAAAGGCAAATTCGGCAGAGTCTACGTCGCCAGAGAACTCAAGAGCAAATTTGTTGTTGCATTGAAGATTATTTCGAAGGAACAACTAGAGAAGTACAAAATCCATCATCAACTGAGGAGGGAAATGGAGATTCAGTTCAGTCTGAAGCACCCGAACATCCTTCGTCTGTATGGCTGGTTTCATGACTCTGAGAACGTCTTTTTGATTCTGGAATATGCTCACAATGGTGAGCTTTACAGGGAGCTTAGCAGAAAAGGGCATTTCAGTGAGTACCAAGCTGCCACGTATATTTTAAGCCTCACAAAGGCATTGGCATATTGTCACGAGAAGCATGTAATTCACAGGGATATCAAGCCAGAAAATTTGTTGCTTGATCATGAGGGTCGTCTTAAGATTGCAGACTTTGGTTGGTCAGTACAGTCTAGAAGCAAAAGGCATACCATGTGTGGAACCTTGGATTATTTAGCACCCGAAATGGTAGAAAAAAAAGCTCATGATTATGCAGTAGATAACTGGACTCTAGGTATCCTTTGCTATGAATTTCTTTATGGTGCTCCTCCATTTGAGGCTGAGAGTCAAGATGATACCTTCAAAAGGATAATGAAGGTTGACCTAAGTTTCCCCTCTACTCCTTATGTATCTTCAGAAGCCAAACATCTTATTAGTAGGCTTCTGGTAAAAGACTCTTCACGAAGACTCTCACTTCAGAGGATAATGGAGCATCCTTGGATAATCAAGAATGCAAATCCTACAGAGTTGATGTCTATTACCTACTTGAACAATACTGTCCATCTCTATGGGGAATGA 870 0.4195 MGENSKRQWSLSDFEIGKPLGKGKFGRVYVARELKSKFVVALKIISKEQLEKYKIHHQLRREMEIQFSLKHPNILRLYGWFHDSENVFLILEYAHNGELYRELSRKGHFSEYQAATYILSLTKALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSRSKRHTMCGTLDYLAPEMVEKKAHDYAVDNWTLGILCYEFLYGAPPFEAESQDDTFKRIMKVDLSFPSTPYVSSEAKHLISRLLVKDSSRRLSLQRIMEHPWIIKNANPTELMSITYLNNTVHLYGE* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01521 289 Gene3D Phosphorylase Kinase; domain 1 2 97 - -
Lapu10g01521 289 FunFam Aurora kinase A 6 97 - -
Lapu10g01521 289 CDD STKc_Aurora 13 265 - -
Lapu10g01521 289 SUPERFAMILY Protein kinase-like (PK-like) 7 277 IPR011009 -
Lapu10g01521 289 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Lapu10g01521 289 SMART serkin_6 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01521 289 PIRSF ILK 3 270 - -
Lapu10g01521 289 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 4 271 IPR030616 GO:0004672
Lapu10g01521 289 FunFam Serine/threonine-protein kinase ark1 6 278 - -
Lapu10g01521 289 Gene3D Transferase(Phosphotransferase) domain 1 98 285 - -
Lapu10g01521 289 Pfam Protein kinase domain 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01521 289 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Lapu10g01521 289 ProSiteProfiles Protein kinase domain profile. 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01521 Lapu-Chr10 26190438 26199041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01521 6 271 CBL-interacting serine-threonine protein kinases AT5G10930 39.927 4.42e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Lapu10g01521 Pkinase 2e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01521 K08850 - gmx:100775802 508.834