Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01482 ATGGAAAGAGGAAGCTTATTTTGTAACTTGTCTTATGATGTTGAAGCTCAAGAGCTGAATTGGAGTAAGAGGGTAAATGTTATAAAAGGGATAGCCTATGGCTTGGCTCACATGCACCATGATTGTACTCCACCCATTGTTCATAGAGACATAAGCAGTAACAACATTTTATTAAACTCTGAGTTACAGGCTTTCATCTCAGACTTTGGTACAACAAGACTTCTTGATTTTCATTCATCAAATCAGACTCTTCCTGCTGGTACTTATGGATATGTTGCTCCAGAATTAGCTTACACCTTGACAGTGACCACCAAATGTGATGTGTATAGTTTTGGAGTTGTGGTTTTGGAAACAATGATGGGTAGACATCCAACTGAATTGATTTCTTCTTTATCAGAACCATCCATTCAGAATAAGAAGTTGAAAGATATATTGGACTCACGTATTCCACTACCATATTTTAGAAAAGATATGCAAGATATTGTGCTTGTTGTAACATTAGCATTAGCATGTTTGTGTCCACACCCAAAATCTAGACCATCAATGCAGGAAATAGCTAATGAGCTTTTAGTTTCTAAACCACCATTGCTTTGGCATTTTGATGGCATTTCCATCCACCAACTCATGAAGCAAAAAATATATATAATTGGTAGAAGT 657 0.3638 MERGSLFCNLSYDVEAQELNWSKRVNVIKGIAYGLAHMHHDCTPPIVHRDISSNNILLNSELQAFISDFGTTRLLDFHSSNQTLPAGTYGYVAPELAYTLTVTTKCDVYSFGVVVLETMMGRHPTELISSLSEPSIQNKKLKDILDSRIPLPYFRKDMQDIVLVVTLALACLCPHPKSRPSMQEIANELLVSKPPLLWHFDGISIHQLMKQKIYIIGRS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01482 219 ProSitePatterns Tyrosine protein kinases specific active-site signature. 46 58 IPR008266 GO:0004672|GO:0006468
Lapu10g01482 219 PIRSF ILK 1 192 - -
Lapu10g01482 219 PANTHER LEUCINE RICH REPEAT KINASE 2 1 193 - -
Lapu10g01482 219 SUPERFAMILY Protein kinase-like (PK-like) 1 190 IPR011009 -
Lapu10g01482 219 Gene3D Transferase(Phosphotransferase) domain 1 1 194 - -
Lapu10g01482 219 ProSiteProfiles Protein kinase domain profile. 1 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01482 219 Pfam Protein kinase domain 3 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01482 219 FunFam MDIS1-interacting receptor like kinase 2 1 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01482 Lapu-Chr10 24876507 24879133 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01482 1 194 Receptor kinase-like Gene Family AT1G72180 39.024 2.97e-40 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu10g01482 Pkinase 5.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01482 - - vun:114165534 416.001