Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01480 ATGGACAAAATGTCCTCTTTATATGTCTCATCAAATCATTTATGTGGATCAATCCCATTAGAAACTATGAAATGTCCCTATGCTATGGTAGTTGATTTAAGCCACAACTTGTTGAATGGAAGCTTAACTTCACAAATTGGTTGTGTCAATGACCTTAGTCTTAGTCACAATTTTCTTGTTGGTGAGATTCCGTTTCTTTGGAGAGCGAGCTACATACTTGATCGATTGGATCTTAGTTATAATAATCTCTCGGGTAAAGTACACAAGGAACTTGCTAGTATATCATATATAAACCTTTCATATAATTCCTTTGACTTCATACCAGAACTTGACTCAAAATCAGAGATATCAGACTACTGTTCTTTTCAGGAAGAATCATTACTTGATTATCACATGACAAATTTCACATACTGTCACATGGTCCACCAAATCAATCCTCAAACTAGAAGAAGTAAGCCTATGATCATGTTAATTGTTCTTTCTGTCATTTTCTCCAGTCTTTTAGTACTCCTTCCAATATTATTTTTCTCAAGATGTATTCTTAAGAAAAAATGTGAGGAAATATCTACAAAGAATGGAGACTTGTTTTCTATATGGAGCTTTGATGGTAAAATTGCATTTGAGGATGTTATTGAAGCAACAGAAGACTTTGACCTCAAGTACTGTATTGGAACAGGTGCATATGGTAGTGTCTATAGAGTACAACTACCTAGTGGCAAAATTGTTGCACTAAAAAAGCTTCATCGTATGGAATCTCAAAATTCATCACTTGACAAAAGTTTTCGGAATGAGGTGAAGATGTTAACAGAAATCCGTCATAAAAACATTGTAAAGCTTCATGGTTATTGTCTCCACAATCGATGCATGTTTCTAATCTATCAATACATGGAAAGAGGGAGTTTATTTTATATTTTGAATAATGATGTGGAAGCTCAGGAGTTGAATTGGAGTAAAAGGGTGAATGTCATTAAAGAGATAGCATATGCTTTATCCTACATGCATAATGATTGTAACCCACCAATTGTTCATCGAGATTTAACAAGTAGTAATGTTCTGTTAAACTCACAATTAGAGGCTTATGTCTCAGACTTTGGTACAGCTAAACTCCTTGATCCTGATTCTTCTAATCAAACATTGGTAGTTGGCACTTATGGCTACATTGCCCCAGAACTTGCTTATACATTGAGCGTGACAGAAAAGTGTGATGTTTATAGTTTTGGAGTGGTGACTCTTGAAACATTAATGGGAAAACATCCTGGAGAGCTTATCACATCTTTATCAAACCTAACTACTCAAAATATATTAGTGAAAGATATCTTGGATTCACGTCTTCCTCCTCCTCTTCAGAAAGATGCTCAAGATATAAATCTTGTGGTATCAATAGCACTATCATGTTTGTCCTTCAAATCAAATTTGAGGCCATCAATGCAACAAGTTGTTGGGAAACTCTCTAACCTTTGCATGAAGATTTGA 1473 0.3483 MDKMSSLYVSSNHLCGSIPLETMKCPYAMVVDLSHNLLNGSLTSQIGCVNDLSLSHNFLVGEIPFLWRASYILDRLDLSYNNLSGKVHKELASISYINLSYNSFDFIPELDSKSEISDYCSFQEESLLDYHMTNFTYCHMVHQINPQTRRSKPMIMLIVLSVIFSSLLVLLPILFFSRCILKKKCEEISTKNGDLFSIWSFDGKIAFEDVIEATEDFDLKYCIGTGAYGSVYRVQLPSGKIVALKKLHRMESQNSSLDKSFRNEVKMLTEIRHKNIVKLHGYCLHNRCMFLIYQYMERGSLFYILNNDVEAQELNWSKRVNVIKEIAYALSYMHNDCNPPIVHRDLTSSNVLLNSQLEAYVSDFGTAKLLDPDSSNQTLVVGTYGYIAPELAYTLSVTEKCDVYSFGVVTLETLMGKHPGELITSLSNLTTQNILVKDILDSRLPPPLQKDAQDINLVVSIALSCLSFKSNLRPSMQQVVGKLSNLCMKI* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01480 490 ProSitePatterns Protein kinases ATP-binding region signature. 223 245 IPR017441 GO:0005524
Lapu10g01480 490 ProSitePatterns Tyrosine protein kinases specific active-site signature. 341 353 IPR008266 GO:0004672|GO:0006468
Lapu10g01480 490 ProSiteProfiles Protein kinase domain profile. 217 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01480 490 Gene3D Transferase(Phosphotransferase) domain 1 296 489 - -
Lapu10g01480 490 FunFam MDIS1-interacting receptor like kinase 2 296 488 - -
Lapu10g01480 490 SUPERFAMILY L domain-like 4 110 - -
Lapu10g01480 490 PANTHER LEUCINE RICH REPEAT KINASE 2 3 485 - -
Lapu10g01480 490 SUPERFAMILY Protein kinase-like (PK-like) 199 482 IPR011009 -
Lapu10g01480 490 Gene3D Ribonuclease Inhibitor 1 135 IPR032675 -
Lapu10g01480 490 Pfam Protein kinase domain 222 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01480 490 Gene3D Phosphorylase Kinase; domain 1 180 295 - -
Lapu10g01480 490 FunFam Leucine-rich repeat receptor protein kinase MSP1 181 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01480 Lapu-Chr10 24828095 24829677 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01480 7 389 Receptor kinase-like Gene Family AT4G08850 39.312 3.42e-86 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu10g01480 Pkinase 6.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01480 - - vun:114166569 797.734