Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01479 TTTCGAAATGAGGTGAAGATATTAACAGAAATTCGTCATAAACACATTGTAAAGCTTCATGGTTATTGCCTCCACAACCGATGCATGTTTCTAATCTATCAATACATGGATAGAGGTAGTTTGTTTTATCTTTTGAATAATGATGTGGAAGCTCAAGAGTTGAATTGGAGTAAAAGGGTGAATGCCATTAAAGGGATGGCACATGCTTTATCCTACATGCATAGTGATTGTACCCCATCAATTATTCATCGAGATTTAACAAGTAGCAATATTTTGTTAGACTCCCAATTAGAGGCTTATGTCTCAGACTTTGGTACAGCTAGACTCCTTGATCCTGATTCATCAAACCAAACCTTAGTTGTTGGTACTTATGGCTACATTGCCCCAGAGCTTGCTTATACAATGAATGTGACAGAAAAGTGTGATGTTTATAGTTTTGGAGTGGTAGCTTTGGAAACATTAATGGGAAAGCATCCTGGAGAGCTAATCTCATCTTTATCAAACTTAACTACTCAAAATAAGTTAGTGAAAGATATCTTGGATTCACGTCTTCCTCTTCCTCTTCAGAAAGATGCTCAAGATATAAATCTTGTGATAACAATAGCATTATCCTGTCTGTCCTCAAAACCAAACTTAAGGCCATCAATGCAGGAAGTGGTTGGGAAACTCTCTAGTTTTGAATTGCCCTCATCTTTATCTTTGCATGAAGTTATGATAAATCAATTGATGAGTCAAGACAAATGTTATTTTTCATTCAAGTATTAG 765 0.3582 FRNEVKILTEIRHKHIVKLHGYCLHNRCMFLIYQYMDRGSLFYLLNNDVEAQELNWSKRVNAIKGMAHALSYMHSDCTPSIIHRDLTSSNILLDSQLEAYVSDFGTARLLDPDSSNQTLVVGTYGYIAPELAYTMNVTEKCDVYSFGVVALETLMGKHPGELISSLSNLTTQNKLVKDILDSRLPLPLQKDAQDINLVITIALSCLSSKPNLRPSMQEVVGKLSSFELPSSLSLHEVMINQLMSQDKCYFSFKY* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01479 254 PANTHER LEUCINE RICH REPEAT KINASE 2 1 226 - -
Lapu10g01479 254 Pfam Protein kinase domain 2 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01479 254 Gene3D Transferase(Phosphotransferase) domain 1 37 241 - -
Lapu10g01479 254 Gene3D Phosphorylase Kinase; domain 1 1 36 - -
Lapu10g01479 254 FunFam MDIS1-interacting receptor like kinase 2 36 228 - -
Lapu10g01479 254 ProSitePatterns Tyrosine protein kinases specific active-site signature. 81 93 IPR008266 GO:0004672|GO:0006468
Lapu10g01479 254 ProSiteProfiles Protein kinase domain profile. 1 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01479 254 PIRSF ILK 1 233 - -
Lapu10g01479 254 SUPERFAMILY Protein kinase-like (PK-like) 1 223 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01479 Lapu-Chr10 24802078 24802967 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01479 1 129 Receptor kinase-like Gene Family AT4G08850 61.240 1.13e-53 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu10g01479 Pkinase 2.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01479 - - vun:114165531 408.297