Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01446 ATGCAGTTCAGACTAGGGAAGCGCGTCATCCGGGTTGCCACATGGATCCTCCGTCGCGTGAAAACCCGACCCAGATATTATTATCGCCTCGGATCTTTCTCTCCTTCGAGGGATAGTCGTAATCAAAATCCCATGACGAAGCTTCTCACGTGGGGGACGAAGTTGAAGAGAGGAGCAAAGTCTCTCTGCAAGAAATCTGGGTCGGGTCCCGTTTGCGAGAGGGCTGCGGCGGTGCCCAAAGGGCACTTGGCGGTTTACGTGGCGGAGGACGACGGCGAGTGTCGCCGGGTTTTGGTGCCGGTGATTTATTTCAACCACCCTCTGTTCAGCGAGTTGTTAAGGGAAGCGGAGAAGGAATTCGGGTTCGAGCACCCCGGTGGGATCACGATTCCATGCCGACTAACCGAGTTTGAACGGGTCAAAACTCGGATCGCGTCCGGGTCGGGTTTACACCGGAGAACGCGGAGATTGGGGTGGCGGCTACGTTCTTGA 492 0.563 MQFRLGKRVIRVATWILRRVKTRPRYYYRLGSFSPSRDSRNQNPMTKLLTWGTKLKRGAKSLCKKSGSGPVCERAAAVPKGHLAVYVAEDDGECRRVLVPVIYFNHPLFSELLREAEKEFGFEHPGGITIPCRLTEFERVKTRIASGSGLHRRTRRLGWRLRS* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01446 163 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 63 139 IPR003676 GO:0009733
Lapu10g01446 163 Pfam Auxin responsive protein 66 141 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01446 Lapu-Chr10 22928561 22929671 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01446 73 137 Calmodulin-binding Proteins AT3G43120 47.692 6.08e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01446 K14488 - gmx:100808164 229.565