Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01436 ATGGCACAACTCAACCTCACATTATTGCTTCTCATTTCCCTCTCTCTCTTCTTCTCATTTCTTGCCACCCCAGTTGAGCCATCATCACTGACAAGACACAGAAATCCCAGAACAATGACCTACATAGAGTCCTCCTGCAATGGCACCCTCTATCCCAATCTCTGTGTCCGTTGCCTGGCCCAATATGCCAAATCCCCCATAAACGGCCCTCAACACCTGGCCCAATATGCCCTCTCAGTCAGCCTCTCTAGGGCAGTGCACACAAAAGGGTACCTCTTGAAAGTGGCAAAGGAACTTCAAGCCATCAAGAGCAACAAAAGAGAGTACCTAACACTGCAAGATTGTGTGAACCAAATCACTGATAGTGTGGAACAACTCAACCAAGCCATGAAAGAGCTACGCAGGTTTAACCAACATGGGTCAAGCATGAATGATAACATGTTGTGGCACATAAGCAATGTCGAGACATGGGTGAGCACTGCCCTGACAGATGCTAGTAGTTGTGTGTACTCACTTCCTGGGCGTAGGATGAGTAAGAGAGTTGCTTCTATTAAGGTCAAGGCCATGAATGTGGCAGAAGTTACAAGTAATGCTCTTTTCTTGTTTCATAGATATGCATCTACCTACCAGAAACCAGCAACTCAAATTACCAAGAAGCCGTAG 663 0.4615 MAQLNLTLLLLISLSLFFSFLATPVEPSSLTRHRNPRTMTYIESSCNGTLYPNLCVRCLAQYAKSPINGPQHLAQYALSVSLSRAVHTKGYLLKVAKELQAIKSNKREYLTLQDCVNQITDSVEQLNQAMKELRRFNQHGSSMNDNMLWHISNVETWVSTALTDASSCVYSLPGRRMSKRVASIKVKAMNVAEVTSNALFLFHRYASTYQKPATQITKKP* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01436 220 NCBIfam pectinesterase inhibitor domain 10 204 IPR006501 GO:0004857
Lapu10g01436 220 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 200 - -
Lapu10g01436 220 CDD PMEI-like_3 44 207 - -
Lapu10g01436 220 SMART PMEI_2 37 201 IPR006501 GO:0004857
Lapu10g01436 220 FunFam Pectinesterase inhibitor 3 37 206 - -
Lapu10g01436 220 Coils Coil 116 136 - -
Lapu10g01436 220 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 205 IPR035513 -
Lapu10g01436 220 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 205 IPR035513 -
Lapu10g01436 220 Pfam Plant invertase/pectin methylesterase inhibitor 41 199 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01436 Lapu-Chr10 22717768 22718430 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01436 32 208 Carbohydrate Esterase AT3G14310 20.787 3.34e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01436 - - gmx:100791798 342.428