Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01423 ATGGATCCCAACAGAGAATATGCAGATGAACAGGATATGGTTGATGTCTTGCTTCAACTCATGAATGATCGCTCCCTTTCGATTCATATCACTTTTGATCACATCAAAGGGGTCCTCATGAACATACTTGCAGCAGGCACAGATACCACTGCAGCCACATCAGTTTGGATGATGACTGCCCTCGTGAAAAATCCAAGAGTAATGAAGAAAGTTCAAGAGGAAATCAGAAACTTGGGAGGTAACAAAGATTTCTTAGATGAAGATGACATTCAGAAACTTTCCTATTTCAAGGCTACGATAAAAGAGACATTGAGATTGCACCCACCAGGCCCATTACTTGTACCAAGAGAATCAAATGAAGAATGCATTATCAATGGCTACAGAATTCCAGCCAAGACCACTGTGTTTGTGAATGCTTGGGTTATTCATAGAGATCCTGAAGCTTGGAAAAATCCTCAGGAGTTTTGTCCTGAAAGATTCTTAGATAGTGCTATAGATTTTCATGGACAAGATTTCGAACTAATTCCTTTTGGATCAGGTCGTAGAATTTGCCCAGGTATATCTATGGCTGTTGTAACATTAGAACTTGTCCTTGCTAATCTTCTTCATTCCTTTGATTGGGAATTGCCTCAAGGGATGGTAGACATTGACCTTGAAGTATTGCCAGGGATTACCCAACACAAGAAGAATCATCTTTGTCTTTGTGCCAAGACTAGGAGCAACATATGA 729 0.4019 MDPNREYADEQDMVDVLLQLMNDRSLSIHITFDHIKGVLMNILAAGTDTTAATSVWMMTALVKNPRVMKKVQEEIRNLGGNKDFLDEDDIQKLSYFKATIKETLRLHPPGPLLVPRESNEECIINGYRIPAKTTVFVNAWVIHRDPEAWKNPQEFCPERFLDSAIDFHGQDFELIPFGSGRRICPGISMAVVTLELVLANLLHSFDWELPQGMVDIDLEVLPGITQHKKNHLCLCAKTRSNI* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01423 242 FunFam Predicted protein 43 234 - -
Lapu10g01423 242 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 177 186 IPR017972 GO:0005506|GO:0016705
Lapu10g01423 242 Coils Coil 68 88 - -
Lapu10g01423 242 PRINTS E-class P450 group I signature 174 184 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01423 242 PRINTS E-class P450 group I signature 34 51 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01423 242 PRINTS E-class P450 group I signature 97 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01423 242 PRINTS E-class P450 group I signature 54 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01423 242 PRINTS E-class P450 group I signature 184 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01423 242 PRINTS E-class P450 group I signature 138 162 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01423 242 PANTHER CYTOCHROME P450 71B11-RELATED 8 237 - -
Lapu10g01423 242 Pfam Cytochrome P450 9 230 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01423 242 PRINTS P450 superfamily signature 45 62 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01423 242 PRINTS P450 superfamily signature 98 109 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01423 242 PRINTS P450 superfamily signature 184 195 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01423 242 PRINTS P450 superfamily signature 175 184 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01423 242 Gene3D Cytochrome P450 2 240 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01423 242 SUPERFAMILY Cytochrome P450 8 239 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01423 Lapu-Chr10 22360950 22369564 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01423 11 242 Cytochrome P450 AT3G26330 54.661 8.75e-86 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01423 - - gmx:100778293 438.343