Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01413 ATGGCTTTCTTCACTCACTGCAACTGTTTGGAGCATAACAAGCCACAGATCCAGAAAGAAAAAGACAAGCTTTATGGATGCTCAAGTTTTCATCTTTGGAACCCTGCCAACCCCATTTGTTCAAAAATACCTGCTTTCAAACCGATGAAGGCCATGCCCTTTCCTTTTGAGGAGTTTCAAGGGAAGGGAGTGTTGGATTTTTCTTCAGCCTCAGATTCATTTTCATTGCTTTTGCATCATCCACAACCAAAGTGGACCATAGACAAAGAGGATTATTGCTATGTGGGCAGCACTGAGCCCACCTCAGTTCTTGACTCCAGAAGAAGCCCGAACTCTTCCACCATGTCCTCTTCCCTTGGCAGTAGCAACACCATCAGCAAGGGTGGCAGTGGTGGTTCAACCAACAACACCACTTGTTATACCCCAACCCTTTCTCAGAACCCTCCTCAGACAGCATTGGAAACCAACACAGAAAAATGTGGACTGAGAATGGAGGACTGGGAGGTTCAAGATCAATCAATTCTGAGACTAATCATGGCAGATGCTGAAGACCCTTCTGTAGGGTTGAGCAAGCTCTTCCAGGGCAGTGGCTGTGGCTCTCAGCAAACTGTTGATTTCAATGCAGGCTTTGGTTTTGTGGATCAAGGGTTGAATATGGTAAGTATTGTTGATCCTTCAGGGAATTACCCTGGTTTCCCTTTTATTGCTGAGAATATAGATGGCCATAACGGTAAGACTGGTTCTTTGTCTGTTGGAGAATCAATGTTTTCTGTTTCTGGTAACAATTCTTTGTTGTTGTCAACATCTCCTGGTGGGTTTAATTCTCAGCAGCAAGTGATTGGAGAGGTGGATGAGAAGCCTCAAGTCATCAATCCCCAGTTTGAGTTAAACCAGACTCAAGTTCAATTATCTGAGAACCCATCTTTCTTTGTGCCAATGATGTACCCCCAATTGCAGGAACAGCAAGTTTTCGTTCAACATCCAGCTAAACGACCCGTTTTTGAGCCTGCTGGGCATAGTTATCAGGCTCCAAGGTTGCCCCTTTTGGATTCAGGGCAAGAGGTGTTTGGTAGGAGGCAGCAAACACAGCTTCCATTGTTTCCTCATCATATGCAACCACAAGTTATGCCATCTGCTAAACAGCAGAAGGCGAGTTCCACCGGAGAAGATGCAAGCCACCAGCTTCAGCAGGCTATATTTGATCAGTTATACAAAACTGCTGAGCTGATAGAAGCTGGGAATCCGGTTCATGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCAATTGGTAAGCCTTTTCAGAGGGCTGCTTTCTACATGAAGGAGGCCTTGATGTCACTGCTTCATTCAAATGCTCACAATGTCTTGGCTTTCTCACCAATCAGTTCCATTTTCAAAATTGGAGCATACAAGTCCTTTTCTGAGATATCACCTGTTATTCAGTTTGCCAACTTCACTTGTAACCAAGCAATCATTGATGCTTTGGAAAGGTTTGATCGAATTCACATTATCGATTTTGATATCGGGTTTGGAGTGCAATGGTCTTCTTTTATGCAAGCGCTTGCCATGAGGAGTAATGGTGTGCCTTCCCTCAAAATCACTGCCATTGTGTCACCCCTCACTTATGATGAGTTTGAGCTCAATGTGACTCAAGAAAAGTTGAACCAATACGCCAAAGACATCAACATGTCTTTTGAGCTCAATGTCTTAAGCATTGAGTCATTGAACACTCCTTCATGTCCACTCTCTGTTCAGTACTATGATAATGAAGCAACTGCTGTGAACATGCCACTTTCTTGTTTCACAAACCACCCATCATTGTTTCCCTTAGTCCTTCGCTTTGTAAAGCAGCTTAGGCCAAAAGTGGTGGTCACTCTGGACAGAAATTGCGACAGACTCGATGCACCATTTTCCACCAATATAGTTCATGCTCTTCATTGTTACTCAGCCTTGCTTGAATCACTTGATGCTGTGAATGTGAACCTAGATGTCCTCCAAAAGATTGAAAAGCATTTCATCTTGCCAGCCCTTAAGAAGACCATAACAGGTCCCCTTCGTTCACAAGAAAAACTACCTACTTGGAGGAACATGTTTCTTCAATATGGCTTCTCTCCATTCACATTTAGCAACATCACTGAAGCTCAAGCTGAGTGTTTAGTGCAGAAGGCACCTGTAAGGGGATTTCAATTGGAGAGAAAGCACTCATCTCTTGTTCTATGCTGGCAGAGGAAAGAACTTATTGCAGTTTCAACTTGGAGATGCTGA 2274 0.4406 MAFFTHCNCLEHNKPQIQKEKDKLYGCSSFHLWNPANPICSKIPAFKPMKAMPFPFEEFQGKGVLDFSSASDSFSLLLHHPQPKWTIDKEDYCYVGSTEPTSVLDSRRSPNSSTMSSSLGSSNTISKGGSGGSTNNTTCYTPTLSQNPPQTALETNTEKCGLRMEDWEVQDQSILRLIMADAEDPSVGLSKLFQGSGCGSQQTVDFNAGFGFVDQGLNMVSIVDPSGNYPGFPFIAENIDGHNGKTGSLSVGESMFSVSGNNSLLLSTSPGGFNSQQQVIGEVDEKPQVINPQFELNQTQVQLSENPSFFVPMMYPQLQEQQVFVQHPAKRPVFEPAGHSYQAPRLPLLDSGQEVFGRRQQTQLPLFPHHMQPQVMPSAKQQKASSTGEDASHQLQQAIFDQLYKTAELIEAGNPVHAQGILARLNHQLSPIGKPFQRAAFYMKEALMSLLHSNAHNVLAFSPISSIFKIGAYKSFSEISPVIQFANFTCNQAIIDALERFDRIHIIDFDIGFGVQWSSFMQALAMRSNGVPSLKITAIVSPLTYDEFELNVTQEKLNQYAKDINMSFELNVLSIESLNTPSCPLSVQYYDNEATAVNMPLSCFTNHPSLFPLVLRFVKQLRPKVVVTLDRNCDRLDAPFSTNIVHALHCYSALLESLDAVNVNLDVLQKIEKHFILPALKKTITGPLRSQEKLPTWRNMFLQYGFSPFTFSNITEAQAECLVQKAPVRGFQLERKHSSLVLCWQRKELIAVSTWRC* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01413 757 Pfam GRAS domain family 401 756 IPR005202 -
Lapu10g01413 757 ProSiteProfiles GRAS family profile. 390 756 IPR005202 -
Lapu10g01413 757 MobiDBLite consensus disorder prediction 100 152 - -
Lapu10g01413 757 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 376 752 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01413 Lapu-Chr10 21998072 22001241 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01413 398 757 GRAS Transcription Factor Family AT4G00150 54.821 4.18e-128 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu10g01413 GRAS 1.3e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01413 - - pvu:PHAVU_010G072700g 1119.76