LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu10g01392	ATGAATGTTTTCATGGGACGAAATGGAGTTTTCATGGGCCCCAAAAGCACAAATCACGAGTCATTGCATGTTAAAAAAATGGCATCTGGTGCTTATTTCTCTGTTCTTCTCCATGGCTTTGTGTTTGTGGCTCTTGCAACTTCAGGTTTCTCACAGTTATCACCTAATTACTATTATTACTCTTGCCCCAAAGCTTTGAGCATCATCGAAAGGGTCGTAAAAGCTGCTGTGAAGAAAGAGCTACGTATGGGCGCATCCTTGCTGCGTCTGCACTTTCATGATTGCTTTGTTAACGGATGTGATGCTTCAATTCTTCTAGACTCCACATCCTGCAATGAGAGTGAAAAGAATGCAAAGCCTAATTTCGGATCTGCAAGAGGATTTCATGTGGTGGATGAGATCAAGAAGGCAGTGGACAAAGCATGTGGAAAACAAGTTGTTTCTTGCGCTGACATATTGGCTGTTGCTGCTCGTGACTCGGTGGTTGCATTAGGTGGTCCCACATGGAAGGTGGAACTAGGGAGAAGAGATTCCACCACAGCAAGTCTAGCAGCAGCAAATGAAAACATTCCAGCACCATCTTTCAGCCTCTCTCAACTCATCACCAACTTCCAGAACCATGGTCTTGATGAGAAGGATCTTGTTGTTCTTTCCGGATCTCACACCATCGGATATGCACGTTGTGATTTTTTCAGGAACCGTATCTACAATGACTCAAACATCGACCCCATCTATGCAAAACAACTTAAACACATTTGCCCTAGAAATGGTAAGGGCTCCAACCTTGCCCCTTTGGACACAACCTCACCCAATTACTTTGGTGTAGCCTTTTTCTACGATTTGATTCAAGAGAAAGGGCTTCTTCACTCTGATCAAGAACTCTACAATGGTGGTTCTGTTGATGCACTGGTTGAATTTTATAGATACAATGCCCAAGCTTTTTACGAGGACTTCGCATATTCGATGATGAAGTTGGGAAATATTCAGCCCCTAACTGGGAATCAAGGCGAAATTCGTGTTAACTGCAGGAAAGTGAACTAG	1041	0.4342	MNVFMGRNGVFMGPKSTNHESLHVKKMASGAYFSVLLHGFVFVALATSGFSQLSPNYYYYSCPKALSIIERVVKAAVKKELRMGASLLRLHFHDCFVNGCDASILLDSTSCNESEKNAKPNFGSARGFHVVDEIKKAVDKACGKQVVSCADILAVAARDSVVALGGPTWKVELGRRDSTTASLAAANENIPAPSFSLSQLITNFQNHGLDEKDLVVLSGSHTIGYARCDFFRNRIYNDSNIDPIYAKQLKHICPRNGKGSNLAPLDTTSPNYFGVAFFYDLIQEKGLLHSDQELYNGGSVDALVEFYRYNAQAFYEDFAYSMMKLGNIQPLTGNQGEIRVNCRKVN*	347

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu10g01392	346	PRINTS	Haem peroxidase superfamily signature	84	98	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Lapu10g01392	346	PRINTS	Haem peroxidase superfamily signature	266	281	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Lapu10g01392	346	PRINTS	Haem peroxidase superfamily signature	213	228	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Lapu10g01392	346	PRINTS	Haem peroxidase superfamily signature	165	177	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Lapu10g01392	346	PRINTS	Haem peroxidase superfamily signature	147	164	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Lapu10g01392	346	ProSitePatterns	Peroxidases proximal heme-ligand signature.	213	223	IPR019793	-
	Lapu10g01392	346	Gene3D	-	56	343	-	-
	Lapu10g01392	346	SUPERFAMILY	Heme-dependent peroxidases	52	346	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Lapu10g01392	346	FunFam	Peroxidase	56	199	-	-
	Lapu10g01392	346	CDD	secretory_peroxidase	52	345	IPR033905	GO:0004601\|GO:0042744

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu10g01392	Lapu-Chr10	21301001	21303916	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu10g01392	51	346	Peroxidase	AT5G05340	58.389	4.51e-124	358

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu10g01392	K00430		-	gmx:100785609	496.508

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