Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01386 ATGGAGCAAAAAGGAAGTGTGCTTATGCAACGATATGAACTAGGGAGATTATTAGGCCAAGGAACTTTCGCAAAGGTTTACCATGCTAGGAACCTCAAAACTGGCATGAGTGTGGCCATAAAAATTATTGATAAAGAGAAGATTCTGAAAGTAGGGATGATTGATCAGATTAAGCGAGAAATTTCAGTGATGAGACTAATCAGGCATCCACATGTAGTTGAGCTTTATGAGGTAATGGCCAGCAAAACTAAAATTTACTTTGTAATGGAGTATGTAAAAGGCGGTGAGCTCTTTGACAAGGTATCCAAAGGAAAGCTCAAGCAGGATGATGCTAGGAAATATTTTCAGCAATTGATCAGTGCTGTTGACTACTGCCATAGCAGAGGTGTATGCCATCGTGATCTGAAACCGGAAAATCTTCTTCTGGATGAAGATGGGAATTTGAAAGTCTCAGATTTTGGGTTAAGTGCCCTTGCTGAAACTAAGCACCAAGATGGATTACTTCATACCACATGTGGTACCCCTGCCTATGTCGCACCAGAAGTGATAAACAGAAGGGGTTATGATGGAGCCAAAGCTGACATATGGTCGTGTGGGGTGATCTTGTATGTTCTATTAGCCGGTTTTCTTCCATTTAGAGATTCAAATCTGATGGAGATGTACAAGAAAATTGGCAAGGGAGAATTCAAATTTCCTAACTGGTTTGCACCGGATGTGCGCAGATTGTTGTCGAAAATCATGGATCCAAACCCAAAGACCAGGATATCAATGGCAAAAATTATGGAAAGTTCCTGGTTCAGAAAGGGGCTACAGAAGCCCACCATTACTCAGAGCAAAGACGAAGAACTAGCTCCTCTGGATGCTGATGGAGTATTTGGTGCTTGTGAGAATGGAGATCCTATTGAACCAGCTAAAGACTCAAAACCATGTAATCTAAATGCTTTTGACATCATCTCCTATTCCTCAGGTTTTGACTTGTCCGGTTTGTTTGAGGAGACTGATCGCAAGAAAGAATCCCGATTTACATCTGACAAGCCTGCCTCTATTATCATCTCCAAGTTGGAAGAAATCTGCAAGCGACTGCGGCTGAAACTGAAGAAGAAAGATAGAGGTTTATTCAAGTTGGAAGGTTCCAGGGAAGGCAGAAAAGGGCCTTTGGGTATTGATGCTGAGATTTTTGAGATCACCCCAGTTTTCCATCTTGTGGAGTTAAAAAAGTCTGGTGGAGACACATTGGAGTACCAAAATCTTTTGAAACAGGAAGTAAGGCCTGCGCTTAAGGACATTGTTTGGAACTGGCAAGGAGAACAGCCACAGCAACTGCAACATGGTGTAGTGCTGAACGAGGAACAACCCTCTTATCCTGTCATATCAGAGATTGTGCCACAACCAGCTGCGTAG 1401 0.4247 MEQKGSVLMQRYELGRLLGQGTFAKVYHARNLKTGMSVAIKIIDKEKILKVGMIDQIKREISVMRLIRHPHVVELYEVMASKTKIYFVMEYVKGGELFDKVSKGKLKQDDARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEDGNLKVSDFGLSALAETKHQDGLLHTTCGTPAYVAPEVINRRGYDGAKADIWSCGVILYVLLAGFLPFRDSNLMEMYKKIGKGEFKFPNWFAPDVRRLLSKIMDPNPKTRISMAKIMESSWFRKGLQKPTITQSKDEELAPLDADGVFGACENGDPIEPAKDSKPCNLNAFDIISYSSGFDLSGLFEETDRKKESRFTSDKPASIIISKLEEICKRLRLKLKKKDRGLFKLEGSREGRKGPLGIDAEIFEITPVFHLVELKKSGGDTLEYQNLLKQEVRPALKDIVWNWQGEQPQQLQHGVVLNEEQPSYPVISEIVPQPAA* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01386 466 Pfam NAF domain 309 367 IPR004041 GO:0007165
Lapu10g01386 466 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Lapu10g01386 466 CDD STKc_SnRK3 11 265 - -
Lapu10g01386 466 Gene3D Transferase(Phosphotransferase) domain 1 3 298 - -
Lapu10g01386 466 FunFam Non-specific serine/threonine protein kinase 307 431 - -
Lapu10g01386 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Lapu10g01386 466 SUPERFAMILY Protein kinase-like (PK-like) 8 277 IPR011009 -
Lapu10g01386 466 FunFam Non-specific serine/threonine protein kinase 2 287 - -
Lapu10g01386 466 Gene3D Kinase associated domain 1, KA1 306 432 - -
Lapu10g01386 466 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Lapu10g01386 466 CDD CIPK_C 313 427 - -
Lapu10g01386 466 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01386 466 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01386 466 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01386 466 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 427 - -
Lapu10g01386 466 ProSiteProfiles NAF domain profile. 307 331 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01386 Lapu-Chr10 21136990 21141079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01386 1 439 CBL-interacting serine-threonine protein kinases AT5G58380 66.520 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lapu10g01386 Pkinase 6.4e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01386 K07198 - gmx:100815651 872.848