Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01374 ATGGGGAATCACAGGTTTAGATTATCAGATATGATTCCAAATGCTTGGTTTTACAAGCTCAGGGACATGGGGAGGGGAAGAAAGCAAAACACCACACTCTCTGGGAAGAAGAAGCAATCTCCATCCACTTCTACCACACTTTCATCAAAACCAAACCAACCCCACCACCAATACAACAACAACCCCAGAAAGTCCTACTACATCACAAGAGACCTCAAAACCTCACCCTCAAACACCCCAAAATTATCCCCTCCCAGAAAATCAACCAAACAAAGAACCAAAAGAAGAGCCCCAAGAACCGCAAAACTTGTCTCCTCAGGTTGTAGCTGTCGCACCACCCTGGAATCCATGTGGACCAAATCAGATTCGCCACAAGAACACTCCTCCTCATCCCCATTTGACTCCTCACCCGAGTCAGACTCCCCAGAATTCAGAACAGACCGTGTTCTCCCGTGTTCTTCATCATTCGATGAAATGGTTTCCCTGTCAACTACCTCTTGCGCCTCTTGCAGGCTTAACACAAGCAAAAACAACGCCCCCAAGGACATCATCATTGACGTGGACAAAAACTCCATAGCAAGAAAGGATAACAAGCTTGATGGCTACTACAATTACAACAACAACCACAGCAACGACTATGATGATACCTTCTCAGAACTTGAGCTTCCTCCAATCATAACCAAGCCACCAAAGTTGTTAAAGAAGAGAGAACTCAAACAAGGGTCGTTGAAGGTGAGAATTGTGAAGGAAGAGTCTGCAATGAAGGAACAGAGGAACAATGGTTCTGTGAGGCGGTTCACTGCGAGTTCTCCGGGGGTGAGGTTGAGGGTCCACTCGCCCAAAATCGCCGGCTGGAAGGGGCGGAAAAGTGTGTCGTCGACGGCGAGTTCCGGCTCCCGGAGAAGCCTCTCGGATAGCTTTGCGGTTGTGAAGTCTTCCTTTGACCCACAGAAGGATTTCAGGGAGTCCATGGTGGAGATGATTCTGGAGAACAACATAAGGGCATCCAAGGACTTGGAAGATCTACTTGCTTGCTACCTTTCTCTCAATTCAGATCAGTACCACGACCTCATCATCAAAGTCTTCAAGCAAATTTGGTTTGATTTGACTCAACCAAGGTAA 1122 0.4715 MGNHRFRLSDMIPNAWFYKLRDMGRGRKQNTTLSGKKKQSPSTSTTLSSKPNQPHHQYNNNPRKSYYITRDLKTSPSNTPKLSPPRKSTKQRTKRRAPRTAKLVSSGCSCRTTLESMWTKSDSPQEHSSSSPFDSSPESDSPEFRTDRVLPCSSSFDEMVSLSTTSCASCRLNTSKNNAPKDIIIDVDKNSIARKDNKLDGYYNYNNNHSNDYDDTFSELELPPIITKPPKLLKKRELKQGSLKVRIVKEESAMKEQRNNGSVRRFTASSPGVRLRVHSPKIAGWKGRKSVSSTASSGSRRSLSDSFAVVKSSFDPQKDFRESMVEMILENNIRASKDLEDLLACYLSLNSDQYHDLIIKVFKQIWFDLTQPR* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01374 373 MobiDBLite consensus disorder prediction 119 147 - -
Lapu10g01374 373 MobiDBLite consensus disorder prediction 27 107 - -
Lapu10g01374 373 Pfam Transcriptional repressor, ovate 313 369 IPR006458 -
Lapu10g01374 373 ProSiteProfiles OVATE domain profile. 309 368 IPR006458 -
Lapu10g01374 373 Pfam DNA-binding domain 1 41 IPR025830 GO:0003677
Lapu10g01374 373 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 65 370 IPR038933 GO:0045892
Lapu10g01374 373 NCBIfam uncharacterized plant-specific domain TIGR01568 307 370 IPR006458 -
Lapu10g01374 373 MobiDBLite consensus disorder prediction 119 139 - -
Lapu10g01374 373 MobiDBLite consensus disorder prediction 27 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01374 Lapu-Chr10 20951982 20953687 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lapu10g01374 Ovate 3.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01374 - - gmx:100803805 510.76