Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01372 ATGTACAAGGGCAGATTAGGAGGGAAATCTCATCTTGGATATGTTGAAACTGACCCTTCTGGTCGATATGGTCGTTTCAGGGACATTCTAGGCAAAGGAGCAGTGAAGGTAGTGTATAGGGCATTTGATGAAGTCCTAGGAATAGAGGTGGCTTGGAACCAAGTCAAGCTTGGTGATGTCTTTCATTCACCAGATCTACTTCAACGCCTTTACTCAGAGGTTCATCTCCTCAAGAACTTGGAACATGACTCCATCATGACCTTCCATGATTCTTGGATTGATGTCAATTATAGAACCTTCAACTTCATCACTGAATTGTTCACCTCTGGCACCCTAAGAGAGTACAGAAAGAAGTACCAGCGAGTAGATATCAGAGCAGTGAAGAACTGGGCACGCCAGATTCTAAGTGGTTTGGAGTATTTGCATAGCCATGATCCTCCTGTGATACATAGAGATCTCAAGTGTGACAATATCTTCATCAATGGCCATCTGGGGCAGGTCAAGATTGGTGATTTGGGCCTTGCAGCCATTCTCAGTGGCTCTCAACATGCACACAGTGTCATAGGTACACCAGAATTTATGGCACCAGAATTGTATGAAGAGGAATATAATGAACTGGTTGACATATACTCCTTTGGGATGTGCATGATAGAAATGTTTACTTCTGAGTTCCCATACAGCGAGTGCTCCAACCCTGCTCAAATATACAAGAAAGTTACTTCAGGGAAACTGCCAGAAGCCTTTTACAGAATCCATGACTTGGAAGCCCAGAGGTTTGTGGGAAAATGTTTGGCAGATGTCTCAGAGAGGTTGTCAGCAAAGGAGCTCTTGTTGGACTCATTTTTAGCCAAGGACCAACTAGACTCCCCACTGTCTAGCCCAACATTACCCAGAAAACAGACCCCCACACTTAATTTCACTGCATCACTGGCCAAAGAGCTACCACCAATGAGTGACCAAACAAAGGACACACACATGACCATCACTGGATCAATCAATGAAGAGGATGACACAATTTTCCTTAAAGTACAAATTTCTAATAAAAAAGGGGAAAAGAGGAATATATTCTTTCCATTTGACACCATAAACGATACTGCAATTGATGTGGCAGTGGAGATGGTTAAAGAACTTGAATTTAGTGACTTGGAACCATTGGAAATTGCTGCAATGATTGAGGAAGAGATATCAGCTTTAGTCCCAACATGGAGGGATTGGAGCACCTCTAAGTATAAAAGACAACATAGTTTTAGCTATGAAGAAGAGTATGATATGAGTAACCACCACCCTTACTTCTCATCATCTTCTCGCTCTTCCTCTCATGGTTCTTCCCACAAGCTTAATTCCCACCTCTGTGGGAACCATTACCCTTTTACACAAGATTGGCCTCAAGATGAACTATTTATGAATGATGATGCGAGCTCTCAAAGCTCAATGAACTCCTTCAAGTGTTTCAATCTCAATTACTATGACCCTGGCAATGAAGATGGGCATGATCCAGCTGTAGTACTAGGAGCAGAAGCCCTTTGCTACTCCCCAAAAGCCAACGAAAAGTGCACCAGATTCTGTCCTCGAGAAGAAATGATGGATGCTGATTCCACCAAACAGTTTTGCAACATGAGAATGGATTCTCACAGGTATCATGGAACCCAGAGGCTAACCAGGATTCGTTCCTTTGTGGATCTAAGGAGACAACAACTGCAACGATCACTGATGGAAGAGATTCACAAGAGGAGGATCTTCAAGACGGTTGGTGCCATTGAGAACATTGGGTTTCAAAATCCAGAGGGAGGTGGAAGTTTTTCTTATTAA 1809 0.429 MYKGRLGGKSHLGYVETDPSGRYGRFRDILGKGAVKVVYRAFDEVLGIEVAWNQVKLGDVFHSPDLLQRLYSEVHLLKNLEHDSIMTFHDSWIDVNYRTFNFITELFTSGTLREYRKKYQRVDIRAVKNWARQILSGLEYLHSHDPPVIHRDLKCDNIFINGHLGQVKIGDLGLAAILSGSQHAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCMIEMFTSEFPYSECSNPAQIYKKVTSGKLPEAFYRIHDLEAQRFVGKCLADVSERLSAKELLLDSFLAKDQLDSPLSSPTLPRKQTPTLNFTASLAKELPPMSDQTKDTHMTITGSINEEDDTIFLKVQISNKKGEKRNIFFPFDTINDTAIDVAVEMVKELEFSDLEPLEIAAMIEEEISALVPTWRDWSTSKYKRQHSFSYEEEYDMSNHHPYFSSSSRSSSHGSSHKLNSHLCGNHYPFTQDWPQDELFMNDDASSQSSMNSFKCFNLNYYDPGNEDGHDPAVVLGAEALCYSPKANEKCTRFCPREEMMDADSTKQFCNMRMDSHRYHGTQRLTRIRSFVDLRRQQLQRSLMEEIHKRRIFKTVGAIENIGFQNPEGGGSFSY* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01372 602 Gene3D Phosphorylase Kinase; domain 1 9 105 - -
Lapu10g01372 602 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 14 477 - -
Lapu10g01372 602 Pfam Protein kinase domain 28 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01372 602 SMART serkin_6 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01372 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Lapu10g01372 602 CDD STKc_WNK 22 282 - -
Lapu10g01372 602 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Lapu10g01372 602 ProSiteProfiles Protein kinase domain profile. 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01372 602 Gene3D Transferase(Phosphotransferase) domain 1 107 288 - -
Lapu10g01372 602 FunFam probable serine/threonine-protein kinase WNK9 107 287 - -
Lapu10g01372 602 SUPERFAMILY Protein kinase-like (PK-like) 26 283 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01372 Lapu-Chr10 20814193 20819995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01372 12 423 MAP Kinase Kinase Kinase AT3G51630 69.398 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lapu10g01372 Pkinase 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01372 K08867 - gmx:100816187 1082.01