Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01340 ATGGGGTGTTTCACTGTTCTGAAATACAAGAAGGAAAAGATCAATAAAATTCGATACACAAAATGCGTCAGCCATAGTGAACATGTTCCTACAGTACTGCCTGAACCTCAAACTCATACTCGTTCCTTGCAGTCTGCACCTCCTAGTTTTAGAAGTAGAGTGAAATCCATTCACCCCATTAATAAAGTCACCAATTACAGAATGCGGGCATTGTCTGCTCCATCAGCTCTTGATGTGGCCAGACAAGATACTTTTACCGCAGTCGAGTTCGAGGATCAAGAGGAATCTAGATACAACGTGGGATCTCTGAAGGGGCAGCATTTATCTAATCCACAACCTTTACCACTTCCATCACACCAGAGTGGTGGTGAATTGAAAGCTACTAGCAGCTTTAAGTTAGGAAGAGCTAGTGGTTCTCTGTATGCTCCTGATGCAGCAGAACAGGATTCTTTGGGCCCAGTTGAGTATGAGGAACTAGAAGAGTCAAAACCCCGAGTTGGATTGGTGAAGGATCATTGTTCAACTAATTCTCAACCTTTGCCTCTTCCATCTCGTCAGGGTGGTGGTGGTGCATTGAAGGCTAATGTCAGCTTTAAGTTGGGAATGACTACTGCTCCTCTATATGCTTGCGGACCTTTGCCTCTTCCACCTACTGGGTTGCTTAGAAACTTATCGTTTGAGGAGATTGCTGCTGCTTGTCACAACTTCTCTTCAGATCGATGCATGTCTGAATGTCTTTCTTCTACCATATATAGTGCTTCGTTTGGTGACGATGCTTCAAGTGGAAAGAAGTTTGAAGCCACTGTCACCCGCCTTCATTCGTCAACTCAGGGATTGAAGGAATTCATAAATGATGTTAATACCCTTGCATCCTTGCAACATCCAAACCTCTGTAAATTGCTAGGATTTCATGCCCGTGATGGTTCTGAACCAAGGATGTTGGTTTACGAGAGGCTATGCCATGGAAGCTTGGACCACCAGTTGTTTGGGAGATCTGATGGTCCTTCAATTGATTGGAACTCACGAATGAAAGTTGCCATATGTGCTGCACAAGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTCCAGGCAATGTATAATGAATTTTCAGCAGCCAACATACAGATTGACAAAGATTTCAGTGCAAAGGTTTCTGGGTATGGTTGTGTTGGACGGATTCCTGAGGAAGAGATTTCGAGCAGTTCATGTGCTATTGGAAACCTGTCAGTGGAGACATTGGAAAAAGGAATTCTTACTCCGAAGAGCTATGTTTGGGGTTTTGGAATTATTCTCTTGGAGGTACTTACTGGCAGAAAGAATCTTGATAGCCATCACCCGAAGGAAGAGAGGAACTTGGTCAAGTGGAGCCGGCCTTTCCTGGCCGACGATTTTCGACTCTCACTGATTATGGATCCTCAACTTAAGGGTCGGTATCCTCCCAAAGCAGCAAGAGCAGTAGCTGACATTGCACAAAGATGCCTCCAGAAGGAGCCATCAGAAAGACCCACCATGAGAACCATTGTTGAGCATCTGAAAGTGGTTCAAGATATGAAATACTCATGTTGGTTCCCACTACAAGAGCCAGCAGCGAAACAAATTTCTAGATCACCAAGTCTTAATGGTATAAAATGTCTCACACCAACGTTGAGTTTCTCTCCCTCAGCAGCAGCAGCGGTAGCAAGACCATCTGTTTCGTCTCAAAGATGGTGTGCTGTACCCACACTGCATCTTCCTCTTCATGCTTGTTCCTCCAATTTCTCTATGGACGAGCTAGGTAGGCTGGAAAGTCGGAAGTCATCATCCTCATTGTTTAGGGGAGCTAGTGTTGAAGGATATTGA 1839 0.4459 MGCFTVLKYKKEKINKIRYTKCVSHSEHVPTVLPEPQTHTRSLQSAPPSFRSRVKSIHPINKVTNYRMRALSAPSALDVARQDTFTAVEFEDQEESRYNVGSLKGQHLSNPQPLPLPSHQSGGELKATSSFKLGRASGSLYAPDAAEQDSLGPVEYEELEESKPRVGLVKDHCSTNSQPLPLPSRQGGGGALKANVSFKLGMTTAPLYACGPLPLPPTGLLRNLSFEEIAAACHNFSSDRCMSECLSSTIYSASFGDDASSGKKFEATVTRLHSSTQGLKEFINDVNTLASLQHPNLCKLLGFHARDGSEPRMLVYERLCHGSLDHQLFGRSDGPSIDWNSRMKVAICAAQGLTFLHEEGPFQAMYNEFSAANIQIDKDFSAKVSGYGCVGRIPEEEISSSSCAIGNLSVETLEKGILTPKSYVWGFGIILLEVLTGRKNLDSHHPKEERNLVKWSRPFLADDFRLSLIMDPQLKGRYPPKAARAVADIAQRCLQKEPSERPTMRTIVEHLKVVQDMKYSCWFPLQEPAAKQISRSPSLNGIKCLTPTLSFSPSAAAAVARPSVSSQRWCAVPTLHLPLHACSSNFSMDELGRLESRKSSSSLFRGASVEGY* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01340 612 MobiDBLite consensus disorder prediction 99 125 - -
Lapu10g01340 612 Gene3D Transferase(Phosphotransferase) domain 1 319 522 - -
Lapu10g01340 612 ProSiteProfiles Protein kinase domain profile. 236 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01340 612 SUPERFAMILY Protein kinase-like (PK-like) 218 523 IPR011009 -
Lapu10g01340 612 PANTHER OS01G0588500 PROTEIN-RELATED 163 515 - -
Lapu10g01340 612 Pfam Protein tyrosine and serine/threonine kinase 260 511 IPR001245 GO:0004672|GO:0006468
Lapu10g01340 612 MobiDBLite consensus disorder prediction 97 125 - -
Lapu10g01340 612 MobiDBLite consensus disorder prediction 32 51 - -
Lapu10g01340 612 Gene3D Phosphorylase Kinase; domain 1 218 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01340 Lapu-Chr10 19554485 19558448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01340 211 515 Receptor kinase-like Gene Family AT4G02010 36.334 1.93e-52 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Lapu10g01340 PK_Tyr_Ser-Thr 7.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01340 - - aprc:113849641 886.715