Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01316 ATGGCTGACGTCATCCACGAAGCTGGGGTTGTTGCAGATCCCACCCAGATCGACGTCAAGCTCTTTAAGCGATGGAGCTCTGATGATGTTCAGGTTAACGACATTTCTCTGGCCGATTACATTGGAGTTGTGGCATCCAAGCACGCCACATACGTTCCTCACACTGCTGGTAGGTACTCTGTGAAGCGGTTCAGGAAGGCCCGGTGCCCCATTGTTGAGAGGCTCACCAACTCTCTTATGATGCACGGTAGAAACAATGGCAAGAAACTCATGGCTGTTAGGATCATCAAGCATGCTATGGAAATTATTCATTTGTTGACTGACCTGAACCCCATCCAAGTTATTGTAGATGCTGTCATCAACAGTGGTCCCCATGAAGATGCAACAAGAATTGGTTTTGCTGGAGTCGTAAGGAGACAGGCTGTGGATATCTCACCCCTTCGCCGAGTTAATCAGGCTATCTATAAAAAATACTAA 477 0.4738 MADVIHEAGVVADPTQIDVKLFKRWSSDDVQVNDISLADYIGVVASKHATYVPHTAGRYSVKRFRKARCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVINSGPHEDATRIGFAGVVRRQAVDISPLRRVNQAIYKKY* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01316 158 NCBIfam 30S ribosomal protein S7 19 155 IPR005716 GO:0003735|GO:0006412|GO:0015935
Lapu10g01316 158 CDD uS7_Eukaryote 20 155 IPR005716 GO:0003735|GO:0006412|GO:0015935
Lapu10g01316 158 SUPERFAMILY Ribosomal protein S7 20 155 IPR036823 -
Lapu10g01316 158 Gene3D Ribosomal protein S7 domain 3 156 IPR036823 -
Lapu10g01316 158 PANTHER RIBOSOMAL PROTEIN S7 17 155 IPR000235 GO:0006412
Lapu10g01316 158 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 4 156 IPR000235 GO:0006412
Lapu10g01316 158 ProSitePatterns Ribosomal protein S7 signature. 73 99 IPR020606 GO:0003723|GO:0003735|GO:0006412
Lapu10g01316 158 Pfam Ribosomal protein S7p/S5e 62 154 IPR023798 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01316 Lapu-Chr10 18201516 18204613 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01316 18 155 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 86.957 2.23e-89 257