Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01279 ATGGCTTTAGCCATGGTAGGCGGTGCACTTCTCTCTGCTTTCCTCGATGTTCTTTTTGAAAGGCTAGCTTCCCCTAAGGTTGTCAACTTGATTCGTCGAAAGAAGCCTGAGAAGTTGCTTAAAAAGGTGGAGAACCAGCTGATAGTTGTTAGAGTTGTGCTTGCTGATGCTGAAAATCGACAAATCACAGACTCCAATGTCAAAAAGTGGCTCGATGTTCTCAGAGATGTTGTCTACGAGGTTGATGACTTGCTTGATGAAGTTTCTACTAAAGCTGCCACTCAAAAGGAGGTAAGCAATTCATTTTCTCACCTTTTCAACAGGAAGAAGATTGTTAGTATTAGTAAGTTGAAAGAAATAATTGAAAGATTAGATGACATTTTAAAACAAAAGGAGGGTCTTGATTTGAAAGAGACTCCTGTGGAGAACAATCAGCCATGGAAAGCTCAGCCAACATCTTTGGAAGATAGATATGAGATATACGGTAGGGATAAAGACAAGGAGGCCATAATGAAGCTGGTGTTAGAGGATGACAAAGATGGAGAAAAAGTGTCTGTGATCCCTATTGTAGGCATGGGTGGGGTTGGAAAAACCACTTTGACTCGATCTGTGTACAACGACGGCAAGTTGACTCAGATATTTGATTTAAAGGCTTGGATTTGTGTTTCTGATATATTTGATATTGTGAAGGTCACAAAAACTATGATAGAGCAAGTTACCAAGATGTCTTGTAATTTAAATGATCTAAATTCAGTTCAACTTGAGTTGATGGACAAGATCAGAAATAAAAAATTCTTAATCGTCTTGGATGATGTTTGGATCGAGGATTGTGATAGCTGGAGCAGTCTTACGAAACCCTTTCTAAGTGGGATTAGGGGAAGCAAAGTTCTCGTGACAACTCGCAATGAAAGTGTAGCGGCTGTAGTCCCTTTTCATACAGTTAAAGTATATCATGTAAACAAATTGTCAAACGAAGATTGTTGGTTGGTGTTTGCAAATCATGCATTTCCTCTGTCAGAAGGCAGTGAGAACAGAGGAACTCTAGAAAAGATTGGAAAAGAGATTGTTAAAAAGTGTAATGGGTTGCCTTTAGCTGCACAGTCACTCGGAGGAATGTTGAGAAGAAAGCAGGCTATCAGGGATTGGAATAATGTACTTGAAAGTGACATTTGGGAACTTCCTGAAACTAAATGTAAAATTATTCCAGCACTCAGAATTAGTTTTCATTATCTCCCTCCACATTTGAAACGGTGCTTTGTTTATTGTTCATTGTATCCCAAGGATTATCAATTTCAAAAAGATGAACTGGTCCTGCTGTGGATGGCTGAAGATCTTGTAAAAGCACAAAGAAAAGGAAAGACTCTAGAAGAAGTTGGTCACGAATATTTTGATGAATTGGTTTCGAAATCTTTTTTTCACTGTTCAAGTAGTCGGACTTGGGGCAATCATTTTGAAATGCATGACCTCATGCACGATCTAGCAACATTCCTTGGAGGCGAATTCTATTTGAGAGCAGATGAACTTGGAAAAGAAACCAAAATTGATAGAAAGACTCGTCATTTGTCATTTACAAGATTCAGTGATCCAGTCTCGGATATTGATATTTTTGATAGAGTAAAATTTCCAAGAACTTTCTTATCGATCAATTTTGAAGATTCTCCATTCAACAACGAAAAGGCACCATGTATTGTAGTGTCCATGCTTAAGTACTTGAGAGTTCTATCGTTCTGTCACTTCCCAAGTCAACTTGCTCTGCCTGATTCAATAGGAGAATTGATCCATTTGCGTTATCTAAATCTCTCTCGAACTAGTATAGAAACACTGCCGGAGTCATTGTGTAATTTGTGCAATCTACAAACTTTGAAGTTGTCTCGTTGCTTTAAGTTGACTAAGTTGCCTAGTGACATACAAAATGTTGTAAACTTGCGTCATCTTGAAATTCCTTATACTCCCATAAAAGAGATGCCTAAAAGAATGGGAAAACTAAATCATTTACAGAAACTGGATTTCTATGTTGTGGGCAAACATAAAGAGAATAGCATCAAAGAACTGGGAGGACTTCCAACTCTCCATGGTTCGTTTTCTATTAAGAAATTAGAGAATGTTACCAAATGTGAAGAAGCATTAGAGGCCAGGATGATGGATAAGAAGCACATTGACCATTTATCCTTGGAATGGTCTATACGCGACGGCGAAACCATCGATTTCCAAATAGAATTAGATGTCCTCAGCAACTTACAACCTCACCAAGATCTGAAATCGCTGACAATAAGCGATTATAAAGGAATCATATTTCCAGATTGGGTGGGAAATTTTTCCTATCAAAATATAACAAATCTATATTTCAAGAATTGTAACAACTGTTCCATGCTTCCTTCACTTGGGCAACTACCATCTCTCAAGGACCTCCGTGTTTCAGACATGAATTCGGTGAAGACTATTGATGCGGGCTTTTATAGGAAGCAAGATTGTTCATCTGTGACGCCCTTTCCCTCCCTTAAATCTCTATACATTACTAATATGCCTTGTTTGGAGGTGTGGAGTTCCTTTGATTCAGAAGCTTTTCCTGTGCTTGAGGATCTTCTTATAAATGAGTGCCCCAAACTAAGGGGAGATTTGCCAAATCACCTTCCTGCTCTGCAAAGGCTCAGCATTAGAAATTGCGAGCTTCTTGTCTCTTCTGTCCCAGGGGCTCCCATCCTTCGAACATTAGAGATACGTAAAAGCAACAAAGTAGCGTTTTGTGTGTTTCCTGTTTCGGTGGAACGTATAGAGATAGAAGGAAGCTCAGTGGTGGAGTCTATGATGGTGGCCATGACTAACTTCCCACCTACTTGCCTCCAATCTTTGACATTACAGGGTTGTTCGTCAGCCATATCTTTTCCAGAGGATCGTCTTCCAGCATCGCTGAAAACTCTGTTTGTCATTGGTTTAAACAAACTGAAATTCCCGATGCAACACAAACACGAATTACTAGAATCACTTTCTATAAATAATAGTTGTGATTCCCTCACGTCTCTTCCACTGATCACCTTTCCAAATCTCTTAAATCTTGAAATCAGAAACTGTGAAAATATGGAATCACTTTTGGTCTTAGGGTCAGAGTCGTTTAATAGTCTGACCTCTTTTAAGATTGGTGGTTGCCCCAACTTTGTATCATTCCCGGGAGAAGGATGGTCTGCGCCCAATTTGACTAGTTTCAGTGTTTATGGTTGTGACAAGTTAAAGTCGTTGTCCGATCAGATGGGTACTCTTGTCCCAAAGTTGGAATTTCTTTGCATATCCAATTGCCAACAAATTGAGTCATTCCCTGGAGTGGGTATGCCACCTAACCTGAGAACAGTTTCGATAAGCAACTGTGAGAAACTATTGAGCGGTCAAGCATGGGCATCCATGGACATGGTTACCTCTCTCAATGTGTGGGGTCCGTGTGATGGCATCAACTCCTTCCCAATGGAGGGATTGTTGCCTCCCTCCCTTGCGTCTCTGTACCTAACTGATTTCTCAAATCTAGAGACGTTGGACTGCAAAGGCCTTCTCCATCTCGCATCGCTGCAAGAATTAGTGATTGTAAGGTGTCAAAAGCTGGAGAATATCGCGGGAGAAGCGCTTCCTGTCTCTCTTATAAAATTAAGCACAGAGGGATGTCCCTTGCTGCAAAAACGATGCCACAAAAAGGACCGTGAAATTTGGCCTAAAATCTGCCATGTTCGTGGGATAAAGATTGATGGTAGATGGATTTAG 3744 0.4009 MALAMVGGALLSAFLDVLFERLASPKVVNLIRRKKPEKLLKKVENQLIVVRVVLADAENRQITDSNVKKWLDVLRDVVYEVDDLLDEVSTKAATQKEVSNSFSHLFNRKKIVSISKLKEIIERLDDILKQKEGLDLKETPVENNQPWKAQPTSLEDRYEIYGRDKDKEAIMKLVLEDDKDGEKVSVIPIVGMGGVGKTTLTRSVYNDGKLTQIFDLKAWICVSDIFDIVKVTKTMIEQVTKMSCNLNDLNSVQLELMDKIRNKKFLIVLDDVWIEDCDSWSSLTKPFLSGIRGSKVLVTTRNESVAAVVPFHTVKVYHVNKLSNEDCWLVFANHAFPLSEGSENRGTLEKIGKEIVKKCNGLPLAAQSLGGMLRRKQAIRDWNNVLESDIWELPETKCKIIPALRISFHYLPPHLKRCFVYCSLYPKDYQFQKDELVLLWMAEDLVKAQRKGKTLEEVGHEYFDELVSKSFFHCSSSRTWGNHFEMHDLMHDLATFLGGEFYLRADELGKETKIDRKTRHLSFTRFSDPVSDIDIFDRVKFPRTFLSINFEDSPFNNEKAPCIVVSMLKYLRVLSFCHFPSQLALPDSIGELIHLRYLNLSRTSIETLPESLCNLCNLQTLKLSRCFKLTKLPSDIQNVVNLRHLEIPYTPIKEMPKRMGKLNHLQKLDFYVVGKHKENSIKELGGLPTLHGSFSIKKLENVTKCEEALEARMMDKKHIDHLSLEWSIRDGETIDFQIELDVLSNLQPHQDLKSLTISDYKGIIFPDWVGNFSYQNITNLYFKNCNNCSMLPSLGQLPSLKDLRVSDMNSVKTIDAGFYRKQDCSSVTPFPSLKSLYITNMPCLEVWSSFDSEAFPVLEDLLINECPKLRGDLPNHLPALQRLSIRNCELLVSSVPGAPILRTLEIRKSNKVAFCVFPVSVERIEIEGSSVVESMMVAMTNFPPTCLQSLTLQGCSSAISFPEDRLPASLKTLFVIGLNKLKFPMQHKHELLESLSINNSCDSLTSLPLITFPNLLNLEIRNCENMESLLVLGSESFNSLTSFKIGGCPNFVSFPGEGWSAPNLTSFSVYGCDKLKSLSDQMGTLVPKLEFLCISNCQQIESFPGVGMPPNLRTVSISNCEKLLSGQAWASMDMVTSLNVWGPCDGINSFPMEGLLPPSLASLYLTDFSNLETLDCKGLLHLASLQELVIVRCQKLENIAGEALPVSLIKLSTEGCPLLQKRCHKKDREIWPKICHVRGIKIDGRWI* 1248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01279 1247 Gene3D Ribonuclease Inhibitor 535 713 IPR032675 -
Lapu10g01279 1247 Pfam Rx N-terminal domain 11 101 IPR041118 -
Lapu10g01279 1247 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 422 IPR027417 -
Lapu10g01279 1247 Coils Coil 114 137 - -
Lapu10g01279 1247 Pfam NB-ARC domain 164 387 IPR002182 GO:0043531
Lapu10g01279 1247 Gene3D - 14 125 - -
Lapu10g01279 1247 Gene3D - 321 406 IPR042197 -
Lapu10g01279 1247 PANTHER DISEASE RESISTANCE PROTEIN RP 49 909 IPR044974 GO:0006952
Lapu10g01279 1247 FunFam Probable disease resistance protein At1g63360 408 496 - -
Lapu10g01279 1247 Coils Coil 40 60 - -
Lapu10g01279 1247 FunFam Probable disease resistance protein At1g61300 142 313 - -
Lapu10g01279 1247 Gene3D - 407 495 IPR036388 -
Lapu10g01279 1247 SUPERFAMILY L domain-like 486 902 - -
Lapu10g01279 1247 Gene3D Ribonuclease Inhibitor 1059 1229 IPR032675 -
Lapu10g01279 1247 Gene3D Ribonuclease Inhibitor 714 874 IPR032675 -
Lapu10g01279 1247 Gene3D - 144 314 IPR027417 -
Lapu10g01279 1247 SUPERFAMILY L domain-like 943 1234 - -
Lapu10g01279 1247 Gene3D Ribonuclease Inhibitor 875 1037 IPR032675 -
Lapu10g01279 1247 PRINTS Disease resistance protein signature 613 629 - -
Lapu10g01279 1247 PRINTS Disease resistance protein signature 186 201 - -
Lapu10g01279 1247 PRINTS Disease resistance protein signature 259 273 - -
Lapu10g01279 1247 PRINTS Disease resistance protein signature 359 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01279 Lapu-Chr10 17162007 17166831 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01279 184 846 WRKY Transcription Factor Family AT5G45050 21.978 4.29e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01279 - - vun:114165446 1924.44