Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01268 ATGACACATTCTCTGTTTGTCTTTCTCTTTCTCCTCCTCATATTCCACGTTTTGTTCAGTTTCATTCCCGCGCTTTCTCTATCCTCCGATGGCCTCGCGCTTCTCGCTCTAAAGTCCGCCGTCGACCAGCCTTCCTCCGCCTTCTCCGACTGGAACGACGGCGACGTCACGCCCTGCGCCTGGTCGGGAATCGTTTGCGCCAACATCTCCGGCGAGGAGGACCCCCGCGTGGTTGGAATCTCCCTCGCCGGAAAATACCTCTCTGGTTACCTCCCATCAGAGCTCGGCACGCTGCGCTTCCTACGGCGACTAAATCTCCACGACAACTCTTTCTCCGGTGTCCTCCCGGCGCAGCTCTCCAACGCCACCGCGCTCCACAGCCTCTTCCTCCACCGCAACAACCTCTCCGGCCCCATCCCCCGCTCCCTCTGCACCCTCCCGCGCCTCCAAAATCTTGACCTCTCTGAAAACGCATTCTCCGGCCACATTCCCGACCACCTCGGAAACTGCAAGAATCTCCAGCGCCTCATTGTCGGCGGCAACAGATTCTCGGGCGAGATTCCCTCCGGCGTCTGGTCGGAACTTCAGAACCTCCTCCAACTCGACCTCTCCGCGAACGAGTTAACCGGTTCAATCCCTGACGAAATTGGAACCCTAGTTTCCCTCTCCGGCACGCTGAACCTCTCCTTCAACCACCTCTCCGGTAAGATTCCGGCGTCGCTGGGAAAATTACCGGCGACGGTGAGCTTCGATTTCAAAAACAACAACCTCAGCGGCGAAATTCCCCAAACGGGGTCGTTTTCAAACCAAGGTCCCACGGCGTTTCTTGGAAATCCTAACCTATGCGGGTTTCCTCTTAGAAAATCATGTTCCGGTTCGGACCGGGATTTTTCTCCCGGTTCGGATCAAAACAAACCAGTTAACCGGCCAAAGGGGTTGAGCCCCGGTTTAATTATTTTAATCTCCGCGGCTAATGCTGCTGTTGTGGCTTTCATTGGGCTTGTGATTGTTTATGTTTATTGGAAGAAAAAAGATGATGAGAATGCGTGTAGTTGCATTAGGAGAAGAAAGTTTGGTGAAGAGAAAGGGAGTGTGTGTGTTTGTGGTGGATTCCCATGTGTTAGTGGGGAGAAAAGTGATGATGATGAAGATTATGAGGTGGAGGGGGCTGAGGGTGAGGGTGAAGGGGAATTGGTGAGAATTGACAAGGGATTGAGTTTTGAACTTGATGAGTTGTTGAGGGCTTCTGCTTATGTGTTGGGGAAGAGTGGGTTGGGCATTGTGTATAAGGTGGTGTTGGGGAATGGGGTGCCTGTGGCTGTGAGGAGGCTGGGGGAGGGAGGGGAACAGAGGTATAAGGAGTTTGCTGCAGAGATTATGGCCATTGGGAAGGTCAAGCACCCTAATGTTGTGAGGTTGAGGGCTTACTATTGGGCACATGATGAAAAGCTTCTCATCAGTGATTTCATCTCCAATGGCAATCTGACACATGCCCTTAGAGGGAGAAATGGTCAACCTTATACAAATCTGTCATGGTCCACCAGGCTGAAAATCGCCAAAGGAACAGCGAGAGGCTTGGCCTATCTCCACGAATGCAGTCCAAGAAAATTCGTCCATGGTGACATCAAACCCTCCAACATCCTACTTGACAACGACTTCCAACCCTACATTTCCGATTTTGGCCTAAACCGTCTGATCAGCATCACCGGCAACAACCCCTCCACCGGAGGATTCATGGGTGGAGCTCTTCCTTACATGAACTCTTCACAGAAAGAGAGAACCAACAATTACAAAGCCCCAGAGGCTCGTGTTCCTGGCTGCAGACCCACCCAGAAATGGGATGTGTACTCATTTGGGGTTGTGTTGCTTGAAATACTAACTGGGAGGTCACCAGAATCATCTCCCACCACATCAACTTCCATGGAAGTTCCTGACTTGGTAAGGTGGGTGAGGAAAGGGTTCGATCAAGAAAGCCCGTTATCTGAGATGGTTGATCCATCGCTGCTCCAAGAAGTGCGTGTTAAGAAAGAGGTGCTGGCTGTGTTTCATGTAGCTTTGGCTTGCACTGAAGGAGACCCTGAGACTCGGCCAAGGATGAAAACTGTCTCTGAAAATCTTGATAAGATTGGAACGTAA 2136 0.5159 MTHSLFVFLFLLLIFHVLFSFIPALSLSSDGLALLALKSAVDQPSSAFSDWNDGDVTPCAWSGIVCANISGEEDPRVVGISLAGKYLSGYLPSELGTLRFLRRLNLHDNSFSGVLPAQLSNATALHSLFLHRNNLSGPIPRSLCTLPRLQNLDLSENAFSGHIPDHLGNCKNLQRLIVGGNRFSGEIPSGVWSELQNLLQLDLSANELTGSIPDEIGTLVSLSGTLNLSFNHLSGKIPASLGKLPATVSFDFKNNNLSGEIPQTGSFSNQGPTAFLGNPNLCGFPLRKSCSGSDRDFSPGSDQNKPVNRPKGLSPGLIILISAANAAVVAFIGLVIVYVYWKKKDDENACSCIRRRKFGEEKGSVCVCGGFPCVSGEKSDDDEDYEVEGAEGEGEGELVRIDKGLSFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEIMAIGKVKHPNVVRLRAYYWAHDEKLLISDFISNGNLTHALRGRNGQPYTNLSWSTRLKIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLNRLISITGNNPSTGGFMGGALPYMNSSQKERTNNYKAPEARVPGCRPTQKWDVYSFGVVLLEILTGRSPESSPTTSTSMEVPDLVRWVRKGFDQESPLSEMVDPSLLQEVRVKKEVLAVFHVALACTEGDPETRPRMKTVSENLDKIGT* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01268 711 Pfam Leucine rich repeat N-terminal domain 28 66 IPR013210 -
Lapu10g01268 711 SUPERFAMILY L domain-like 28 287 - -
Lapu10g01268 711 SMART serkin_6 418 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01268 711 SMART LRR_typ_2 146 170 IPR003591 -
Lapu10g01268 711 SMART LRR_typ_2 195 219 IPR003591 -
Lapu10g01268 711 SMART LRR_typ_2 98 121 IPR003591 -
Lapu10g01268 711 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 27 193 - -
Lapu10g01268 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 537 549 IPR008271 GO:0004672|GO:0006468
Lapu10g01268 711 CDD STKc_IRAK 420 709 - -
Lapu10g01268 711 ProSiteProfiles Protein kinase domain profile. 414 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01268 711 Gene3D Transferase(Phosphotransferase) domain 1 490 711 - -
Lapu10g01268 711 FunFam Leucine-rich repeat receptor-like protein kinase 197 292 - -
Lapu10g01268 711 MobiDBLite consensus disorder prediction 692 711 - -
Lapu10g01268 711 SUPERFAMILY Protein kinase-like (PK-like) 419 705 IPR011009 -
Lapu10g01268 711 Pfam Protein kinase domain 419 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01268 711 Gene3D Phosphorylase Kinase; domain 1 406 489 - -
Lapu10g01268 711 Gene3D Ribonuclease Inhibitor 27 190 IPR032675 -
Lapu10g01268 711 Gene3D Ribonuclease Inhibitor 191 292 IPR032675 -
Lapu10g01268 711 Pfam Leucine rich repeat 101 158 IPR001611 GO:0005515
Lapu10g01268 711 FunFam Os07g0541700 protein 493 580 - -
Lapu10g01268 711 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 166 709 IPR046959 -
Lapu10g01268 711 FunFam Leucine-rich repeat receptor-like protein kinase 397 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01268 Lapu-Chr10 16944010 16947974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01268 23 709 Receptor kinase-like Gene Family AT1G67510 68.458 0.0 942
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu10g01268 Pkinase 3.7e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01268 - - var:108346287 1323.92