Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01257 ATGGCTCCAAAAAATCTCTTTGGCCTCCTCATCTTTCTCATTCTCCTAGTTTCTTCCACTGCTTTTTCCTTCACATTCCATGGCTTCAATGAAAGCAATATCACTTTTGAAGAGAAAGCACAGATTGACAATCAAGGTAGACTTGAGCTTACCAGAAGAGAGAACAATATTGTTGGCCATGCATTCTATAACAAATCCATCAAAATACTCGACAAAACAAATGCTTCAGTCCTCCAGCCAAAAGTTTTTTCCTTTAGTACATGCTTTGTTTTCTCAATTGTGTCACCAAGCTCTGGCCCTGGTGGGTTTGGTCTTGCCTTCACTATAGCTCCTTCAACACAATTCCCGGGAGCTGAAGTTGGCCATCTTCTTGGTCTTTTCAACTCTTCCAATGATATGAACTCCTCAAATCATATCTTACTGGTTGAGTTTGATACAGTGAATGGCTACAAAGATGCCACTGACACTGTAGGAAACCATGTGGGGGTGAACAAAAATGGCATGTCCTCAAATATATCTGAGCCTGCCGCTTACTTTAAAGAGGGCAAAAAGGAAGAGTTCAACATGGAGAAGGCTGACACTGTTTGTACTTGGATTGAATATGATGGTGAAACAGAAATAATGAATGTCACTATAGCCCCTTATTTGGAACCAAAACCAAGCACACCACTTATAACAAGGTTTGTTGACATCAAATCTGTCATGAAGGACAACATGTTTTTCGGTTTCTCTGCATCAACAGGTAAGAGGAAAGCAAGTGCCCATTATATTCTGGGATGGAGCTTTGCATTGAATGGGGTTGCCCCTCCACTAGATGCTTCACTCCTTCCAAAGCCACCTCCAAAGGAGAAAGACTCGTACTCTTTTCCTTGGATCAAGGTTGTAGTTGGCATCTTGTCTGCTTTGACATTTACCTTGTTGTGCCTTTTGTTTTATGTGACACTCTATAAGAGATATATGGTCTTTGAAACTCTTGAGGACTGGGAGATGGATTGTCCTCATAGGTTCAGATATAGAGATCTTCACTTAGCAACAAAGGGGTTCGTACAGAGCCAACTAATTGGAGTCGGAGGCTTTGGTTCTGTGTACAAAGGGGTGTTACCTAGCACAGGAACTGAGGTTGCTGTTAAAAGGATCCTGAGAAGTCCAGCCCAAGGAATGAGGGAATTTGCAGCTGAGATTGAAAGCTTAGGAAGATTGAGGCACAAGAATTTGGTCAACCTTCAAGGGTGGTGCAAACACAAGAATGATCTCCTCCTAATTTATGATTATATTCCGAATGGGAGCCTTGACTCTCTCCTATTCAACAAAAACTTTGTTTTGGATTGGGACCATAGATTCAAAATTCTCAAAGGTGTAGCTGCAGGGCTGTTGTATCTTCATGAAGAATGGGAGCAAGTGGTGATCCATAGAGATGTGAAATCTAGCAATATTCTTATTGATAGGGACTTCAATGCTCGTTTGGGTGACTTTGGACTAGCAAGGCTTTATAGCCATGATCAAGTGTCACACACAACAAGTGTGGTTGGCACCATTGGGTATATTGCACCAGAGTTAACTAGGACAGGAAAAGCATCTACAAGCTCTGATGTATACGCATTTGGGGTCCTACTTCTTGAAATGGTTGCTGGAAGAAGGCCTGTTGGTTCATCGGGTCAGTTTTTCTTGGTGGACTGGGTTCTTGAAAATAGCCAACTTGGTCAGATTCTTGAAGTGGTTGATCCAAAACTAGATTCAGTTTATGATGAAGAGGAAGTAGAGTTGGTTCTGAAATTGGGTCTACTATGCACTCAAAACAAAGCTGATTATAGACCCTCTGTCGAACAAGTGACTAGGTACCTAAACTTTGATGACCCTTTTCCTGATATCTCTGATTGGAGATACTATGATTCTCAAAGTAGCACAACAAGCTTAGGTTTTTTAGAAGCCATGTCTACGGTTAAGACTTCATCCTCGTACAGTCTACCCTCCATTGTCCAGAGTACAATGTCCATAGAAACTGGTAGGTAG 2010 0.4169 MAPKNLFGLLIFLILLVSSTAFSFTFHGFNESNITFEEKAQIDNQGRLELTRRENNIVGHAFYNKSIKILDKTNASVLQPKVFSFSTCFVFSIVSPSSGPGGFGLAFTIAPSTQFPGAEVGHLLGLFNSSNDMNSSNHILLVEFDTVNGYKDATDTVGNHVGVNKNGMSSNISEPAAYFKEGKKEEFNMEKADTVCTWIEYDGETEIMNVTIAPYLEPKPSTPLITRFVDIKSVMKDNMFFGFSASTGKRKASAHYILGWSFALNGVAPPLDASLLPKPPPKEKDSYSFPWIKVVVGILSALTFTLLCLLFYVTLYKRYMVFETLEDWEMDCPHRFRYRDLHLATKGFVQSQLIGVGGFGSVYKGVLPSTGTEVAVKRILRSPAQGMREFAAEIESLGRLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLFNKNFVLDWDHRFKILKGVAAGLLYLHEEWEQVVIHRDVKSSNILIDRDFNARLGDFGLARLYSHDQVSHTTSVVGTIGYIAPELTRTGKASTSSDVYAFGVLLLEMVAGRRPVGSSGQFFLVDWVLENSQLGQILEVVDPKLDSVYDEEEVELVLKLGLLCTQNKADYRPSVEQVTRYLNFDDPFPDISDWRYYDSQSSTTSLGFLEAMSTVKTSSSYSLPSIVQSTMSIETGR* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01257 669 CDD STKc_IRAK 354 615 - -
Lapu10g01257 669 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 281 IPR013320 -
Lapu10g01257 669 SMART serkin_6 348 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01257 669 ProSiteProfiles Protein kinase domain profile. 348 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01257 669 PANTHER - 20 616 - -
Lapu10g01257 669 Gene3D - 20 268 - -
Lapu10g01257 669 Pfam Protein kinase domain 349 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01257 669 FunFam L-type lectin-domain containing receptor kinase S.4 425 626 - -
Lapu10g01257 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Lapu10g01257 669 SUPERFAMILY Protein kinase-like (PK-like) 331 625 IPR011009 -
Lapu10g01257 669 FunFam Lectin-domain containing receptor kinase VI.3 333 424 - -
Lapu10g01257 669 FunFam L-type lectin-domain containing receptor kinase V.9 21 267 - -
Lapu10g01257 669 ProSitePatterns Protein kinases ATP-binding region signature. 354 377 IPR017441 GO:0005524
Lapu10g01257 669 Gene3D Phosphorylase Kinase; domain 1 333 424 - -
Lapu10g01257 669 CDD lectin_legume_LecRK_Arcelin_ConA 22 266 IPR001220 GO:0030246
Lapu10g01257 669 Gene3D Transferase(Phosphotransferase) domain 1 425 624 - -
Lapu10g01257 669 Pfam Legume lectin domain 23 275 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01257 Lapu-Chr10 16571504 16573513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01257 24 639 Receptor kinase-like Gene Family AT5G01560 51.817 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lapu10g01257 Pkinase 6.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01257 - - vra:106770487 1188.33