Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01239 ATGTGTGAATGCTTAAAAGGGTTCAAGCCTAAGTATCCTGAGAAATGGAACTCAATGGAACGGTCCCAAGGATGTGACCTCAAATATCCACTTAGCTGCAGAGACAAGTTGGATGATAGTTTTTTCTTCATGGATGGCTTGAAAGTACCGGATACTGAATATACGTTTGTGGATGAGACTATTGATTTAAAACAATGCAAAACCAAGTGTTTGAATAATTGTTCGTGCATGGCATATACCAAGTCAAATATAAGTGGAGCAGGCAGTGGCTGTGTCATGTGGTTTGGTGATTTATTTGACATCAAACTGTTTTCAAATAAAGAAATGGGGCAGCGTCTATATATAAGGTTGAATCCTTCAGAATTAGAGTCTATCAGGCGCAAGAAGAACACTAAAATAATATTTGTAACCTCCACTGCTGCAACTTTTGGAGTGATGCTTGCTATTTATTTTGTCTACAGAAGGAACGCTACAGATAAGTCAAAGACAAATGAAAACATTGAAAGACATCTACGTGTTCTGGATATGACTTGGTTTGATCTTTTATCAATAACAACAGCTACTAAAAATTTCTCATTGAATCATAAGATTGGACAAGGTGGTTTTGGACCCGTATATAAGGGAAAATTAGTGGATGGTCGAGAAATTGCTGTCAAGAGACTTTCAAGTAGCTCAAGACAAGGAATAACTGAGTTCATGACAGAAGTGACTTTGATTGCAAAGCTTCAACACCGAAATCTTGTAAAGCTCCATGGTTGTTGCTTTCAAGGACAAGAAAAGTTACTAGTATATGAATACATGGTTAATGGCAGCCTAGACACCTTCATTTTTGATAAAATAAAAGGTAAATTGCTGGAATGGCCCCAACGCTACCACATAATATTTGGGATTGCCAGGGGGCTTTTGTATCTACATCAAGATTCCCAGTTGAGGATTATTCACAGAGATCTCAAAGCAAGTAATGTTTTACTTGACCAAAAACTAAATCCAAAAATATCAGATTTTGGAATGGCCAAGGTTTTTGGAGGAGACCAAATAGAAGGAAACACAAACAGAGTTGTTGGGACTTATGGATACATGGCCCCAGAATATGCTGTTGATGGACTATTTTCAATCAAATCGGACGTTTTCAGCTTTGGTATTTTGGTGTTGGAGATTGTATGTGGCAACAAAAATAGAGCTCTTTGTCATGGCAACCAGACTCTTAACCTTGTTGGTTATGCATGGACACTTTGGAAAGAGCAAAATGCTTTACAGTTGATTGACTCAAGCATAGGAGACTCGTGTGTTGTCTCAGAAGTACTGCGATGCATCCATGTTAGTCTCTTGTGCTTGCAACAATACCCGGATGATAGGCCAACCATGGCCTCGGTAATTCAAATGTTAGGGAGTGAGATGGAACTGGTTGAGCCAAAAGAGCCTGGTTTCTTTCCATCAAGAAGGATTTCGGACCAAGGAAAATTAAGCTCAAATCTAAACCAAAAGACTTCGAATGACGAATTAACCGTTACCTCCCTAAATGGCCGGTGA 1530 0.3889 MCECLKGFKPKYPEKWNSMERSQGCDLKYPLSCRDKLDDSFFFMDGLKVPDTEYTFVDETIDLKQCKTKCLNNCSCMAYTKSNISGAGSGCVMWFGDLFDIKLFSNKEMGQRLYIRLNPSELESIRRKKNTKIIFVTSTAATFGVMLAIYFVYRRNATDKSKTNENIERHLRVLDMTWFDLLSITTATKNFSLNHKIGQGGFGPVYKGKLVDGREIAVKRLSSSSRQGITEFMTEVTLIAKLQHRNLVKLHGCCFQGQEKLLVYEYMVNGSLDTFIFDKIKGKLLEWPQRYHIIFGIARGLLYLHQDSQLRIIHRDLKASNVLLDQKLNPKISDFGMAKVFGGDQIEGNTNRVVGTYGYMAPEYAVDGLFSIKSDVFSFGILVLEIVCGNKNRALCHGNQTLNLVGYAWTLWKEQNALQLIDSSIGDSCVVSEVLRCIHVSLLCLQQYPDDRPTMASVIQMLGSEMELVEPKEPGFFPSRRISDQGKLSSNLNQKTSNDELTVTSLNGR* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01239 509 SUPERFAMILY Protein kinase-like (PK-like) 166 462 IPR011009 -
Lapu10g01239 509 CDD PAN_AP_plant 30 117 - -
Lapu10g01239 509 Gene3D Transferase(Phosphotransferase) domain 1 267 472 - -
Lapu10g01239 509 SMART serkin_6 191 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01239 509 SMART ntp_6 36 117 IPR003609 -
Lapu10g01239 509 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 154 266 - -
Lapu10g01239 509 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 267 470 - -
Lapu10g01239 509 ProSiteProfiles Protein kinase domain profile. 191 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01239 509 CDD STKc_IRAK 197 462 - -
Lapu10g01239 509 ProSiteProfiles PAN/Apple domain profile. 33 118 IPR003609 -
Lapu10g01239 509 Gene3D Phosphorylase Kinase; domain 1 152 266 - -
Lapu10g01239 509 Pfam Protein tyrosine and serine/threonine kinase 192 462 IPR001245 GO:0004672|GO:0006468
Lapu10g01239 509 Pfam PAN-like domain 36 101 IPR003609 -
Lapu10g01239 509 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 489 - -
Lapu10g01239 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 312 324 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01239 Lapu-Chr10 16023115 16027334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01239 179 504 Receptor kinase-like Gene Family AT4G23150 54.740 1.10e-122 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu10g01239 PK_Tyr_Ser-Thr 2.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01239 - - gmx:100808227 857.825