Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01227 ATGGCCACCGCAACGGCAACAGCAGCGGCAACGTCCTCCTTCATGGGGACGCGCCTCCTGGACGCGCATTCCGGGTCTGGGCGGGTCCAGGCGCGATTCGGGTTCGGGTCCAAGAAGAAGGCCGCTCCCAAGAAGGTGTCCAAGGGCCCAGGCTCTGACAGGCCGCTGTGGTACCCGGGCGCGAAGGCGCCGGAGTGGCTAGACGGAAGCCTGGTCGGCGACTACGGGTTTGACCCGTTCGGGCTCGGAAAGCCCGCGGAGTATTTGCAGTTTGAGCTGGACTCGCTGGACCAGAACCTGGCGAAGAACGAGGCCGGGATCATCATTGGCACAAGGACCGAAGCTGTGGATGTGAAGTCAACGCCGTTCCAGCCCTACAGCGAGGTCTTCGGCCTCCAGAGGTTCCGTGAGTGCGAGCTCATCCACGGACGCTGGGCCATGCTCGCCACCCTCGGAGCCCTCACCGTTGAGTGGCTCACCGGTGTCACGTGGCAGGATGCCGGCAAGGTGGAGCTAGTAGAAGGGTCATCTTACCTTGGGCAACCACTTCCATTCTCAATCACGACATTGATTTGGATCGAGGTTCTGGTAATTGGGTACATAGAGTTCCAGAGGAACGCAGAGCTTGACCCAGAAAAGAGGTTGTACCCAGGTGGCAGCTACTTCGACCCTCTTGGTTTGGCCTCAGACCCAGAGAAGAAAGCCACTCTTCAATTGGCAGAGATCAAGCACGCACGTCTTGCCATGGTGGGCTTCTTGGGCTTTGCAGTCCAAGCTGCTGCCACTGGCAAGGGCCCACTCAACAACTGGGCCACCCACTTGAGTGACCCACTTCACACAACCATCATTGACACATTCTCATCCTCTTAA 870 0.592 MATATATAAATSSFMGTRLLDAHSGSGRVQARFGFGSKKKAAPKKVSKGPGSDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNEAGIIIGTRTEAVDVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01227 289 FunFam Chlorophyll a-b binding protein, chloroplastic 112 288 - -
Lapu10g01227 289 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 285 IPR001344 GO:0009765|GO:0016020
Lapu10g01227 289 Pfam Chlorophyll A-B binding protein 63 259 IPR022796 -
Lapu10g01227 289 SUPERFAMILY Chlorophyll a-b binding protein 50 287 - -
Lapu10g01227 289 Gene3D Chlorophyll a/b binding protein domain 57 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01227 Lapu-Chr10 15671787 15674962 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01227 15 289 Chloroplast and Mitochondria Gene Families AT3G08940 87.681 1.45e-176 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01227 K08915 - gmx:100785180 543.888