Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01220 ATGAGCAGCTCAAAGTCTCGTCAGTCGAACACCTCACGCTGGAGCTATTCTTCTTCCTTTCAAAATTCCTCCCATGGCATATCTCTCATTGCTGCTTCTTCGGCAAGGTCAAGCAGTGCATTTTCCACTCCAAATCACACACTTACATCAAATTCATCCACTTCACGAAACTCCAACAAAATCTCTGGTCAACATCACGTGCCAAGGTCAAGCTCTCAATCCACCATCTCTGATGAACAAAGAAGAAAATGGTTGCGTTCAACGACCTCAAATCCTTCTACTTCAAGAAACTTCGACAATATCTCTCGTCAACAGTATACAACAATGCCAAGTTCTCACTCCAATATCTCTAGTGAACGAGAAAGAAGAAGATCTCGAGCCTCTCTTTCATCAAAACATTCTACTTCATTTTCATCAGACCCTTCTGCTTCACGAAATTCCAACAACACCTTCGATCAACAACAACGTGTGATAGGGTCAAGTTTTGACTCTAACATCTCTAATGAAGCACAAAGAGGTAGTCGATTGCCCAGGTTTCCATCAAATCCTTATACATGGCAAAACCTCAACATCTTTGGTCAACCGCACATGACAACGTCAAGTTCTGATTCCATCATCTCTAATGAACCACAAATAGGAACATGGTTACCCTGCAGGTTTCCATCAAATCCTTATACATGGCAAAACTTCAACATCTTTGGTCAACCGCATCTGCCAACGTCAAGTTCTGATTCCATCATATCTCATGAACCACAAATAGGAACATGGTTACCCTGCAGGTTTCCATCAAATCCTTATACCTGGCAAAACTCCAACATCTTTGGTCAACCGCACATGACAGTGTCAAGTTCTGATTCCGTATCTAATGACCCACAAAGAGGAAGATGGGTGCACTCGTTTCCATCAAATCCATATCCTTGGCAAAACTCGAACTTCTTTGGTCAACCGCACACGACTGTGACAAGTTCTAATTCCAGCATCTCTAATGACCCGCAAACAGGAAGTTGGGTGCGCTCGTTCCAATCAAATCCTTCTACTTTGCAAAACTCCATCAACAGCTCTGATCAACAACATATCACAGCGTCAAAAATTTCCCCGGGTGTTTCTTTGCGTTCTGCAACTCGAATCAGCATCTTTGTGGTTCTTCTTTGTGTGATTGGTGCTTGGATTCTGGGAATACAAATGAACCTCAACTTCAACCTCCTAGAGACAGGTTCTCTTGCTTTGGCAATAATAACAATTATAACCACAGCCTTCAAATTACAGGATGGAACTTCTTACTACATGAAAGGCCTTCTGCTCTTCTTGTGTTACATTGTTATTGGGGCATGCTTTTTTCGTACAAAGAACACCCTCCAGTAA 1362 0.4229 MSSSKSRQSNTSRWSYSSSFQNSSHGISLIAASSARSSSAFSTPNHTLTSNSSTSRNSNKISGQHHVPRSSSQSTISDEQRRKWLRSTTSNPSTSRNFDNISRQQYTTMPSSHSNISSERERRRSRASLSSKHSTSFSSDPSASRNSNNTFDQQQRVIGSSFDSNISNEAQRGSRLPRFPSNPYTWQNLNIFGQPHMTTSSSDSIISNEPQIGTWLPCRFPSNPYTWQNFNIFGQPHLPTSSSDSIISHEPQIGTWLPCRFPSNPYTWQNSNIFGQPHMTVSSSDSVSNDPQRGRWVHSFPSNPYPWQNSNFFGQPHTTVTSSNSSISNDPQTGSWVRSFQSNPSTLQNSINSSDQQHITASKISPGVSLRSATRISIFVVLLCVIGAWILGIQMNLNFNLLETGSLALAIITIITTAFKLQDGTSYYMKGLLLFLCYIVIGACFFRTKNTLQ* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01220 453 MobiDBLite consensus disorder prediction 86 115 - -
Lapu10g01220 453 MobiDBLite consensus disorder prediction 130 179 - -
Lapu10g01220 453 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 362 448 IPR004713 GO:0006812|GO:0008324|GO:0016020
Lapu10g01220 453 MobiDBLite consensus disorder prediction 1 78 - -
Lapu10g01220 453 MobiDBLite consensus disorder prediction 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01220 Lapu-Chr10 15558229 15559896 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01220 364 449 Antiporters AT2G38170 62.791 8.45e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01220 K07300 - pvu:PHAVU_010G001600g 126.716