Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01212 ATGGCAACCCAATTGAACCATGTGTTCAGAACTTCAATTCTGAAGCACAAAACACAATCAGAGACCCCTTTGAGAATCTCTCGGAGAACCCCAAGATTTCAAGGGATCAATGCAGCATCTTCTACCAGGAGTGCAAGGCAGCTCATAGAGTCTGGCACAGTGAGGCCTATATTGCCCAAAGAGGCTTCCTTAGCCATAAATTCAGAGGGCTTTATTCTCCTTGATGTTAGGCCAACGTGGGAGAGAGAGAAGGCACGTGTGGCAGGGTCTTTGCACGTGCCAATCTTTGTGGAAGACAAGGATAATAGTCCTATAACTTTACTTAAGAAGTGGGTGCATTTTGGATACATTGGCTTGTGGACTGGCCAGTACCTCACCACTGTGAATTCTGAGTTCCTTAGTGAAGTGGAAAATGCCATTCCAAGTAAGGACACCAAGCTTCTTGTGGCATGTGGAGAAGGATTGAGGTCAATGACAGCAGCTTCAAAACTGTATAATGAAGGTTACAAAAATCTGGGATGGTTGGCTGGAGGATTTAATCGTTCAAAGGACAAAGACTTTCCATCAGCTGAAGGAGAAGAGAAGTTGCAGCATGCTACAATTGGGGGGGTTTCTTACATATTCCTTCAGTTGCTCATATTTCTAAAGGCTGTGGATTAA 660 0.4439 MATQLNHVFRTSILKHKTQSETPLRISRRTPRFQGINAASSTRSARQLIESGTVRPILPKEASLAINSEGFILLDVRPTWEREKARVAGSLHVPIFVEDKDNSPITLLKKWVHFGYIGLWTGQYLTTVNSEFLSEVENAIPSKDTKLLVACGEGLRSMTAASKLYNEGYKNLGWLAGGFNRSKDKDFPSAEGEEKLQHATIGGVSYIFLQLLIFLKAVD* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01212 219 Pfam Rhodanese-like domain 59 181 IPR001763 -
Lapu10g01212 219 SMART rhod_4 57 188 IPR001763 -
Lapu10g01212 219 Gene3D - 54 201 IPR036873 -
Lapu10g01212 219 CDD RHOD 61 180 - -
Lapu10g01212 219 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 10 1 218 IPR044614 -
Lapu10g01212 219 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 50 191 IPR036873 -
Lapu10g01212 219 ProSiteProfiles Rhodanese domain profile. 67 191 IPR001763 -
Lapu10g01212 219 FunFam Rhodanese-like domain-containing protein 10 54 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01212 Lapu-Chr10 15439435 15440590 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01212 1 206 Sulfurtransferasese or Rhodanese AT3G08920 56.796 4.25e-82 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01212 - - gmx:100795945 377.867