Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01207 ATGGGAGTGGACTATTACAAACTTCTTCAGGTAGATCGAAGTGCCAGCGATGAGGATCTCAAGAAAGCTTATCGCAGGCTTGCTATGAAGTGGCATCCTGATAAGAACCCTAACAATAAAAAAGATGCCGAAGCCAAATTCAAGCAAATCTCGGAAGCCTATGATGTTTTGAGTGATTCACAAAAGAGGGCAGTGTATGATCAATATGGTGAGGAGGGATTGAAAGGGCAGGTGCCACCCCCGGGCGCTGGTGGATTTTCCGGTGGCAATGATGGTGGACCGACAACTTTCCGGTTCAACCCTAGAAGTGCAGATGATATATTTTCGGAGTTCTTTGGGTTTTCGAGTCCCTTTGGAATGGGGGATATGGGTGGCCGTGCCGGTCCATCTGGCTTTCCCAGATTTGGGGATGAAATGTTTACTTCTTTTACTAGGGGTGCGGCTGGAGAAGGCTCCGGCAATATGCCAAGGAAAAGTGCACCAATTGAGAGAACATTGCAATGCAGTTTGGAGGATTTATACAAGGGGACTACCAAAAAAATGAAAATTTCCAGGGATGTGATTGATGCTAGTGGGAGACCCACCACTGTAGAGGAAATTCTAACCATTGAGATCAAGCCAGGTTGGAAGAAAGGAACAAAAATAACTTTTCCAGAGAAGGGAAACGAGCAAAGAGGAGTTATACCAGCTGATCTTGTTTTTATTATTGATGAAAAACCTCATGGTGTCTTCAAAAGGGATGGCAATGATCTTGTTGTCACACAGAAGATATCCCTTGTTGAAGCTCTCACTGGTTACACCGCACAACTGACAACTCTTGACGGCCGCAACCTTACCATAACGACCAACTCCATCGTTAGTCCGACGTACGAAGAAGTGATCAAAGGAGAGGGTATGCCCATTCCCAAGGAACCTTCCAAAAGGGGAAATTTGAGGATCAAGTTCAATATCAAGTTCCCCTCTAGACTTACATCAGAGCAGAAAACTGGCATTAAGCGATTATTGACATCTCCATAA 1017 0.4494 MGVDYYKLLQVDRSASDEDLKKAYRRLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDSQKRAVYDQYGEEGLKGQVPPPGAGGFSGGNDGGPTTFRFNPRSADDIFSEFFGFSSPFGMGDMGGRAGPSGFPRFGDEMFTSFTRGAAGEGSGNMPRKSAPIERTLQCSLEDLYKGTTKKMKISRDVIDASGRPTTVEEILTIEIKPGWKKGTKITFPEKGNEQRGVIPADLVFIIDEKPHGVFKRDGNDLVVTQKISLVEALTGYTAQLTTLDGRNLTITTNSIVSPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSRLTSEQKTGIKRLLTSP* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01207 338 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 335 - -
Lapu10g01207 338 FunFam DnaJ subfamily B member 13 241 321 - -
Lapu10g01207 338 SUPERFAMILY HSP40/DnaJ peptide-binding domain 243 329 IPR008971 GO:0006457|GO:0051082
Lapu10g01207 338 SMART dnaj_3 3 62 IPR001623 -
Lapu10g01207 338 CDD DnaJ 4 59 IPR001623 -
Lapu10g01207 338 Pfam DnaJ C terminal domain 162 320 IPR002939 -
Lapu10g01207 338 Gene3D - 241 321 - -
Lapu10g01207 338 MobiDBLite consensus disorder prediction 72 97 - -
Lapu10g01207 338 CDD DnaJ_C 160 323 - -
Lapu10g01207 338 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Lapu10g01207 338 SUPERFAMILY HSP40/DnaJ peptide-binding domain 162 241 IPR008971 GO:0006457|GO:0051082
Lapu10g01207 338 Pfam DnaJ domain 4 67 IPR001623 -
Lapu10g01207 338 SUPERFAMILY Chaperone J-domain 3 119 IPR036869 -
Lapu10g01207 338 FunFam DnaJ subfamily B member 13 3 122 - -
Lapu10g01207 338 Gene3D DnaJ domain 3 124 IPR036869 -
Lapu10g01207 338 PRINTS DnaJ domain signature 42 62 IPR001623 -
Lapu10g01207 338 PRINTS DnaJ domain signature 6 24 IPR001623 -
Lapu10g01207 338 PRINTS DnaJ domain signature 62 81 IPR001623 -
Lapu10g01207 338 PRINTS DnaJ domain signature 24 39 IPR001623 -
Lapu10g01207 338 FunFam Dnaj homolog subfamily b member 158 239 - -
Lapu10g01207 338 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Lapu10g01207 338 Gene3D - 161 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01207 Lapu-Chr10 15360882 15364782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01207 5 69 C2H2 Transcription Factor Family AT1G74250 36.232 3.15e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01207 K09510 - gmx:100777607 608.986