Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01204 ATGGAGGATCATCATCTCCATCGCCACCATGGGCAACAACAACCAAGGCTTCAGCCTCAGAATATGAGTGCCAACGTGGATGTGACTGATAGGTTTCCCCAATGGAGCATCCAAGAGACTAAGGAGTTTCTCGTGATTCGTGCAGAGTTGGATCAGACTTTCATGGAGACTAAGAGGAACAAGCAGTTGTGGGAAGTGATCTCAACGAGAATGAAGGAAAAGGGTTACCATAGAAGTGCAGAGCAGTGCAAGTGCAAGTGGAAAAACCTTGTTACTCGCTACAAGGGGTTTGAAACAATGGAGCAAGAAGCGACGAGGCAGCAATTCCCATTTTACAATGAATTCAATGCGATTTTCACGGCAAGGATGCAGAGAATGCTGTGGGCTGAAGCTGACAGTGGATCGAAGAAGAACAAGGGGTCGCAGCTTTCATCGGATGAAGAAGATGGCAATGAAGAGAGTGCAGAAGCTGGTGGGGGCAGAAAGAAGAAAAAGGCAAAGATAGCTACTGGGGGTGGGGGTGGTAGCAGCAGTTTGAACAGTTTAAAGGAGATTTTGGAGGAGTTCATGAGGCAACAGATGCAGATAGAAGCACAATGGATGGAAGCATTCGAGGCAAGGGAAAACGAGAGGAGGTTGAAGGAGATGGAGTGGAGGCAAGCCATGGAGGTGTTGGAGAATGAGAGGATAATGATGGAAGAAAGTTGGAGAGAAAGGGAGGAACAAAGGAGGGTTAGAGAAGAAGCTAGGGCTGAGAAGAGGGATGCTCTAATCACAGCTTTGCTAAACAAGCTAGAGAGGCAAGAAATGTGA 813 0.4736 MEDHHLHRHHGQQQPRLQPQNMSANVDVTDRFPQWSIQETKEFLVIRAELDQTFMETKRNKQLWEVISTRMKEKGYHRSAEQCKCKWKNLVTRYKGFETMEQEATRQQFPFYNEFNAIFTARMQRMLWAEADSGSKKNKGSQLSSDEEDGNEESAEAGGGRKKKKAKIATGGGGGSSSLNSLKEILEEFMRQQMQIEAQWMEAFEARENERRLKEMEWRQAMEVLENERIMMEESWREREEQRRVREEARAEKRDALITALLNKLERQEM* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01204 270 CDD GT1 33 96 - -
Lapu10g01204 270 MobiDBLite consensus disorder prediction 1 20 - -
Lapu10g01204 270 FunFam Zinc finger and SCAN domain-containing 20 35 96 - -
Lapu10g01204 270 Pfam Myb/SANT-like DNA-binding domain 34 118 IPR044822 -
Lapu10g01204 270 ProSiteProfiles Myb-like domain profile. 35 91 IPR001005 -
Lapu10g01204 270 Gene3D - 35 96 - -
Lapu10g01204 270 PANTHER FI21293P1 15 266 - -
Lapu10g01204 270 Coils Coil 179 199 - -
Lapu10g01204 270 MobiDBLite consensus disorder prediction 131 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01204 Lapu-Chr10 15152035 15153454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01204 30 267 Trihelix Transcription Factor Family AT5G01380 53.759 7.01e-71 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lapu10g01204 Myb_DNA-bind_4 8.2e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01204 - - gmx:100818384 388.267