Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01162 ATGGCGCACAGGCCTTTCAAATTCAGTGAGGATATTCTCGAGCAAGTCAGAAATGGGACTGCAAAATTTGAGCTTGTTTCTTCCCCGGTTCCTTCAGTCACTGCTCCTCCTAACAGCAACACAAGCTTGTTTGGAATCGGGAATCGTAGCACCCTCTTTTTCGCTAGAATTGGCTCGTCCTTTAGTGGACAATCTCCAGCAATGAAGAAACTTGAGCATTTTTCAGTTCAGAAGATTACAGGGGATGGGCGGTGTCTGTTTCGTGCACTGGTTAAAGGAATGGCTTACAATAAGGGAACTGTTCTCAATCAACACGACGAGAGAGAAAATGCAGATGAATTAAGAATGGCTGTGAAAGAAGCTATATGTGAAAATGAAGGTGAACGTAATTTATATGAAGAAGCCCTCATTGCCATCACAGTTGATGAGTCTCTAAAACGTTACTGCCAACGGATTGTGCGACCTGACTTCTGGGGAGGAGAATCAGAGCTATTGGTACTGTCAAAGTTATGTAAGCAGCCAATCATTGTCTACATACCAGAGCATGAGCATAGAGGTGGTGGTTTTGGATCTGGTTTCATTCCCATTGCAGAGTATGGAAGTGAATTTAGAAAGGGTTCTAGGAGAAAAGCTGTGAGGCTATTGTACAGCGGCAAGAACCATTATGATCTTCTAGTATGA 681 0.4332 MAHRPFKFSEDILEQVRNGTAKFELVSSPVPSVTAPPNSNTSLFGIGNRSTLFFARIGSSFSGQSPAMKKLEHFSVQKITGDGRCLFRALVKGMAYNKGTVLNQHDERENADELRMAVKEAICENEGERNLYEEALIAITVDESLKRYCQRIVRPDFWGGESELLVLSKLCKQPIIVYIPEHEHRGGGFGSGFIPIAEYGSEFRKGSRRKAVRLLYSGKNHYDLLV* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01162 226 SUPERFAMILY Cysteine proteinases 73 226 IPR038765 -
Lapu10g01162 226 Gene3D - 49 226 - -
Lapu10g01162 226 FunFam Cysteine proteinases superfamily protein 53 226 - -
Lapu10g01162 226 CDD OTU_plant_OTU3-like 72 226 - -
Lapu10g01162 226 ProSiteProfiles OTU domain profile. 74 226 IPR003323 -
Lapu10g01162 226 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 51 226 - -
Lapu10g01162 226 Pfam OTU-like cysteine protease 80 222 IPR003323 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01162 79 178 C2H2 Transcription Factor Family AT1G50670 31.000 6.03e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01162 - - gmx:100807522 415.231