Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01156 ATGCATGGAAGTTTTAAAAAGCTTACGGCTTATAATCGGATAGTGAGCCTTGTGAAACATTGGAGGAGGGCACTTTGTGAGGCTGCTGGCATCTTGAGGTTGTTAGCCTCACATTACAGAGGAACAAAGGATAATGGCATCAACTACCTCGTGAAGCATGCTAAGGACGCACTTCGTGAGGCTGCTGGCATCTCAGGGGTTGTAATCCTCAATTCTAGGAATGAAAGCGAGGCTATAAAAAATATTGTTAAAAATGTAACAAGTTTGTTGGACAAGACAGAGTTGTTTGTTGCCAATAATCCAGTCGGAGTAGAATCTCGAGTGCAAGAAATGGTTCAATTGCTAGACCAAAACCAATCAAACGATGTTCTACTACTAGGTGTATGGGGGATGGGAGGCATTGGTAAAACAACTATTGCAAAAGCAATTTACAATAAGATTGGCCGCAATTTTGAGGGAAGGAGTTTCCTTGCAGATATTAGGGAAGTTTGGGGGCAAGAAGCTGGCCCTGTTTGTTTACAAGAACAACTTCTATTTGATATCCACAAAGAACACAATACAAAGATACATAACATTGAATCAGGAAAAATTATAGTAAGAGAAAGACTTCACCGTAAAAGGGTACTTGTTATACTTGATGATGTAAATAAATTACAGCAATTAAATGTTTTGTGTGGAAATCGTGAATGGTTTGGTTCTGGAAGTAGAATAATCATCACAACCAGAGACATACACATACTTAGAGGGAAAAGAGTTGACCAAGTGTTCACAATGACAGGAATGGACGTAGACGAATCAATTGAGCTTTTTAGTTGGCACGCATTCAAGCAAGCAAGTCCCAAAGAAGATTTTATTGAACTTTCAAGAAACGTAGTTGCTTATTCTGGAGGATTGCCATTAGCTCTGGAAGTCCTTGGGTCGTATTTGTTTGATATGGAGGTAACAGAGTGGAAGAGTGTATTGGAAAAACTCAGGAAAATTCCTAATGATGAAGTGCAGGAAAAGTTAAAAATAAGCTATGATGGTTTAAGTGATGATACAGAGAAAGGAATATTCCTTGATATAGCATGTTTCTTTATAGGAAAGGATCGAAATGATGTTATACATATATTAAATGGATGTGAACTTTTCCCAGAAAATGGAATACGTGTCTTGGTAGAGCGAAGCCTTGTAACTGTAGATGATAAGAACAAACTTGGAATGCATGATTTGCTACGGGACATGGGAAGAGAAATTATTCGTTCAAAATCACCAATGGAGCTTGAGGAGCGTAGCAGGTTATGGTTTCACGAGGATGTGCTTGATGTGTTATCAAAAGAATTTGGAACAAAATTTATTGAGGGATTGACTTTGAAGTTACCAAGAAGTAATGCAAAATCTCTAAGCACTAAAGCTTTTATGAACATGAAGAAACTCAGGTTGCTGCAACTTTCTGGTGTAGAACTTGTTGGAAATTTTGAATATCTTTCCAAAGACCTTAGATGGCTTTGTTGGCATGGATTTCCTTTTGCCTTCATACCAACAAGCTTTTATCAAGGAAGTCTAGTTTCTATCGAGTTAGAAAACAGTAAGATTATAATGATGTGGAAAGAGACCCAGCTGATGGAGAAGTTGAAAATTCTTAATTTAAGTCATTCTCATTATTTAACAAAGACTCCAGACTTTTTGAATTTGCCTAATCTGGAAAAGTTGGTACTCATGGATTGTCCAAGGCTGTCTGAAGTTTCATATACCATTGGACATCTCACTAAAGTTCTACTAATAAATTTTGAAGATTGTATTAGCCTTTGTAACCTTCCAAGAAGTATCTATAAGTTGAAATCTCTTAAAACACTCATTCTAGCTGGATGTTTAAAGATTGACAAGTTGGAAGAGGACTTAGAACAGATGGAGTCTTTGACAACCCTTATTGCAGATAAGACTGGTATAACAAGAGTGTCGTTTTCAATAGTTAGATCAAAAAGTATTGGATATATTTCATTATGTGGTTATGAAGGATTTTCACGTGATGTGTTTCCCTCTATCATTTGGTCTTGGATGTCACCATTAAATAGTCTCTCTTCCCGTGTTCAGACATTCGTGGACATGTCATCTCTTGTTTCTTTAGATGTACAAAATAGCAGTTCCAATCAGCTATCATATATCTCAGAGGAGCTTCCAAAGCTTCAAAGTCTTTGGATAGAGTGTGGGTCAGATCTTCAACTTTCTCGAGATACAATAAGTATTTTGAATGCTTTATATGCGACAAACTCTGAAGAATTGGAGTCATCTAGAACATCACAAATGAAGAATGTATTTACATTAATTGAATGCAACTCAAGATCAAAATGTTTTGAGAAAACACTTTTGATTCAAATGGGAACGAGTTGGGAAATTACAAATATTCTGAAACAGAGAATTTTACAGAATATGACTACAAGTGATGGCAGTGATTGGTTGCTCCCTGACGATTGTTATCCAGATTGGTTAACCTTTAGCAGCAAGGGTTCTTCTGTGACTTTTGAAATCCCTCAAGTGAATGGTCGTAACTTGAAGACAATGATGTTCCATATCCATTATTCTTCGTCTGATAATATAACATCAGACGGCCTGAAAAATTTGTTGGTGATAAATCACTCAAAGACCACCATTCAGCTCTATAAGAGAAATGCATTAGCATCGTTTGAAGATGAGGAGTTGCAGAGGGTACTATCAAACATTGAGCCTGGAAACAAGGTTCAAATTGTTGTTGTTTTCTGGAGCAGATTAATTGTTAACATGACGACAATTTATCTAATATACGAGGCAATTGATGAAAAAATAGAGCACTACCATGCACCAAATATGAATGTAAGTGTTTCCAATTATGAATCTTTATGTGTTGTTGGGTCGATCTCTCGAGTGGAATCTGTGGAGGACTTGAGGTGTGTTTCCGTAAAAAGCCTAACTAAACGCTTATTGAATAAATTATTATCATGTAAATACTTTTGTAATGGAAAATTGGAAAAGAAGAACAATCAAGGTTAA 3006 0.3649 MHGSFKKLTAYNRIVSLVKHWRRALCEAAGILRLLASHYRGTKDNGINYLVKHAKDALREAAGISGVVILNSRNESEAIKNIVKNVTSLLDKTELFVANNPVGVESRVQEMVQLLDQNQSNDVLLLGVWGMGGIGKTTIAKAIYNKIGRNFEGRSFLADIREVWGQEAGPVCLQEQLLFDIHKEHNTKIHNIESGKIIVRERLHRKRVLVILDDVNKLQQLNVLCGNREWFGSGSRIIITTRDIHILRGKRVDQVFTMTGMDVDESIELFSWHAFKQASPKEDFIELSRNVVAYSGGLPLALEVLGSYLFDMEVTEWKSVLEKLRKIPNDEVQEKLKISYDGLSDDTEKGIFLDIACFFIGKDRNDVIHILNGCELFPENGIRVLVERSLVTVDDKNKLGMHDLLRDMGREIIRSKSPMELEERSRLWFHEDVLDVLSKEFGTKFIEGLTLKLPRSNAKSLSTKAFMNMKKLRLLQLSGVELVGNFEYLSKDLRWLCWHGFPFAFIPTSFYQGSLVSIELENSKIIMMWKETQLMEKLKILNLSHSHYLTKTPDFLNLPNLEKLVLMDCPRLSEVSYTIGHLTKVLLINFEDCISLCNLPRSIYKLKSLKTLILAGCLKIDKLEEDLEQMESLTTLIADKTGITRVSFSIVRSKSIGYISLCGYEGFSRDVFPSIIWSWMSPLNSLSSRVQTFVDMSSLVSLDVQNSSSNQLSYISEELPKLQSLWIECGSDLQLSRDTISILNALYATNSEELESSRTSQMKNVFTLIECNSRSKCFEKTLLIQMGTSWEITNILKQRILQNMTTSDGSDWLLPDDCYPDWLTFSSKGSSVTFEIPQVNGRNLKTMMFHIHYSSSDNITSDGLKNLLVINHSKTTIQLYKRNALASFEDEELQRVLSNIEPGNKVQIVVVFWSRLIVNMTTIYLIYEAIDEKIEHYHAPNMNVSVSNYESLCVVGSISRVESVEDLRCVSVKSLTKRLLNKLLSCKYFCNGKLEKKNNQG* 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01156 1001 Coils Coil 620 640 - -
Lapu10g01156 1001 Gene3D - 97 254 IPR027417 -
Lapu10g01156 1001 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 37 637 IPR044974 GO:0006952
Lapu10g01156 1001 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 355 IPR027417 -
Lapu10g01156 1001 SMART AAA_5 122 262 IPR003593 GO:0016887
Lapu10g01156 1001 Gene3D - 261 344 IPR042197 -
Lapu10g01156 1001 Pfam NB-ARC domain 105 332 IPR002182 GO:0043531
Lapu10g01156 1001 SUPERFAMILY "Winged helix" DNA-binding domain 330 437 IPR036390 -
Lapu10g01156 1001 PRINTS Disease resistance protein signature 533 549 - -
Lapu10g01156 1001 PRINTS Disease resistance protein signature 202 216 - -
Lapu10g01156 1001 PRINTS Disease resistance protein signature 125 140 - -
Lapu10g01156 1001 PRINTS Disease resistance protein signature 295 309 - -
Lapu10g01156 1001 Gene3D - 2 96 IPR035897 -
Lapu10g01156 1001 Gene3D Ribonuclease Inhibitor 426 807 IPR032675 -
Lapu10g01156 1001 SUPERFAMILY L domain-like 451 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01156 Lapu-Chr10 14255500 14272926 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01156 102 647 WRKY Transcription Factor Family AT5G45050 34.315 1.39e-75 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01156 - - var:108322530 1715.28