Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01149 ATGAAGGTGCTGGTGGAGCTGATGGCGGACTTCGAGTCGAACATGGTGGACAAGTCGGCGTATGTGGTGAGCGTGCTGGTGGCGATGCCGGAGGCGAGGGCGGCGCTGGTGGAGGAAGGCGGCGTGCCGGTGCTGGTTGAGATCGTTGAGGTGGGAACGCAGAGGCAGAAGGAAATCGCAGTTGTTATTCTTTTGCATGTGTGCGAAGATAGCGTGACGTATCATTCTATGGTGGCTCGCCGACGCTACTCTTTTATTTAA 261 0.5632 MKVLVELMADFESNMVDKSAYVVSVLVAMPEARAALVEEGGVPVLVEIVEVGTQRQKEIAVVILLHVCEDSVTYHSMVARRRYSFI* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01149 86 Gene3D - 1 82 IPR011989 -
Lapu10g01149 86 SUPERFAMILY ARM repeat 2 77 IPR016024 -
Lapu10g01149 86 PANTHER U BOX DOMAIN-CONTAINING 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01149 Lapu-Chr10 14164673 14165485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01149 1 78 U-box Gene Family AT3G54790 44.872 2.29e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01149 - - gmx:100797550 128.642