Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01144 ATGCCTTCCTCTTCCACCACCGTCGTCTCCAAATGCGTCATCCATCCCGACCTCAAATCCAACATGAAACCACTCAAACTCTCTGTTTCTGACCTTCCAATGTTGTCGTGTCACTACATCCAAAAGGGCGTCTTGCTCACTGCCCCACCCTCTTCCTTCGAAGACCTCATTCTCTCTCTCAAACACTCTCTCTCCGCCGCTCTCTCCCACTTCCCCGCCCTCGCCGGCCGTCTCTCCACCGACTCCCAGGGTTACGTCCACATCGTCTGCAACGACGCAGGCGTCGACTTCATCCACGCCAAGGCCAAGCACCTAACTCTAAACGCAGTCGTTTCGCCCTCGCTCGTTGATGTTCACCCTTGCTTCAAGGAATTCTTCGCCTACGACATGATGATCTCCTACGCCGGCCACCACAACCCCCTCGCCGCCGTCCAGGTCACCGAGCTCGCCGACGCCGTCTTCGTCGGCTGCACCGTCAACCACGCCGTCACCGACGGCACCTCCTTCTGGCACTTCTTCAACACCTTCGCCGCCATCACCAAAGGCGGCGGCGCCAAAAAAGTACTCCGCGCGCCGGATTTCACGCGCGATACCGTTGTCAACTCCGACGCCGTCCTCTTCGTTCCCGCCGGAGGCCCCGCCCTCACCTTTGACGCCAACAAACCCATCCGCGAACGCGTCTTCCACTTCTCCCGCGAATCCATTCAGAAACTCAAACTTAGAGCAAACGCCAACACCAACGAACTAACGGAATTAATGGGAAAACAAGTGAATGACGGTTGGAAAAACGTTAATGGAAACGGAAACGGAAAAGTTAACTGTAACGGAAACGGAAAAGTTAACGGTAACGGAAGAAACGAGATCTCATCGTTTCAGTCGTTATCTGCTCAGCTCTGGCGTGCGGTGACACGTGCGAGGAAATTCAGCGACCCTGCCAAAACGTCGACGTTTCGGATGGCGGTTAATTTCCGCCACCGTTTGGAGCCGAAGATGGACGCGTTTTACTTCGGCAATGCGATTCAGAGCATTCCAACCGTCGCAACCGTGGGGGATATTCTCTCAGGCGATCTGCGTTCCTGCGCGGAGTTGCTGCACCGGAACGTGATCGCACACGATGACGCTACGGTTCGCCGCGGCATAGAGGATTGGGAGAACGCGCCGAGGCTGTTTCCTCTCGGGAATTTCGACGGCGCCATGATCACCATGGGAAGCTCCCCGCGTTTTCCCATGTACGACAACGACTTCGGCTGGGGAAGGCCCGTCGCGATCCGGAGTGGCAAAGCGAACAAGTTCGACGGCAAAATCTCCGCGTTTCCGGGGAGAGAAGGAAACGGCAGCGTGGATCTGGAAGTCGTTTTGGCTCCGGAGACCATGGCGGGGCTCGAAAACGACATGGAGTTTATGCAATACGTAACGCAGGTGGTGTGA 1428 0.5644 MPSSSTTVVSKCVIHPDLKSNMKPLKLSVSDLPMLSCHYIQKGVLLTAPPSSFEDLILSLKHSLSAALSHFPALAGRLSTDSQGYVHIVCNDAGVDFIHAKAKHLTLNAVVSPSLVDVHPCFKEFFAYDMMISYAGHHNPLAAVQVTELADAVFVGCTVNHAVTDGTSFWHFFNTFAAITKGGGAKKVLRAPDFTRDTVVNSDAVLFVPAGGPALTFDANKPIRERVFHFSRESIQKLKLRANANTNELTELMGKQVNDGWKNVNGNGNGKVNCNGNGKVNGNGRNEISSFQSLSAQLWRAVTRARKFSDPAKTSTFRMAVNFRHRLEPKMDAFYFGNAIQSIPTVATVGDILSGDLRSCAELLHRNVIAHDDATVRRGIEDWENAPRLFPLGNFDGAMITMGSSPRFPMYDNDFGWGRPVAIRSGKANKFDGKISAFPGREGNGSVDLEVVLAPETMAGLENDMEFMQYVTQVV* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01144 475 Gene3D - 221 468 IPR023213 -
Lapu10g01144 475 Pfam Transferase family 7 468 - -
Lapu10g01144 475 SUPERFAMILY CoA-dependent acyltransferases 60 182 - -
Lapu10g01144 475 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 469 - -
Lapu10g01144 475 Gene3D - 6 206 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01144 Lapu-Chr10 14006317 14008356 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01144 60 463 Monolignol Biosynthesis Gene Families AT5G48930 26.056 1.69e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01144 - - var:108346317 825.854