Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01104 ATGAACAGGATTTGTACTATCTGTTTCAATCTTCACATTATTTTTGCAACTGTTCTTGCACTTTTCTCACGCATATCATTTCAGCTTGGTTCCAAGGTAGAAGTGCTTCCTGGCTTTGAAGGACCTCTTCCTTTTGAACTGGAAACAGGGTATGTAGGATTGGGAGAAACAGATGATGATATGCAAGTGTTTTACTACTTTATCAAATCAGAGAATGAACCTGCAAAAGATCCTCTTATGCTGTGGCTAACTGGAGGTCCTGGTTGTTCTTCATTTTCGGGTCTTGCCTTTCAAATAGGTCCACTTATATTCAAGCATGATGAGTATGATGGGAGCTTGCCAAATTTGACCTTGAGGCCACAGTCCTGGACAAAGGTATGTAGCATTATTTTTGTAGATTTGCCCTTTGGAACTGGCTTCTCGTATGCAAAAAATGTCACAGCTCAAAGGAAGGATTGGAAGTTAGTTCACCATACCCATCAATTTCTTAGGAAGTGGCTGATTGATCACCCAGAATTTCTTTCAAATGAATTTTACATGGGAGCTGATTCATATTCTGGCATACCTGCCCCTGCCATTGTTCAAGAAATTTCAAAGGGAAATGAAATAGGTCTTCAACCACCGATAAATCTCAAGGGATATCTACTAGGGAACCCCATAACAACAAGAAAAGAAAAAAATGACCAAATCCCATTTGCTCATGGAATGGGACTTATTTCTGATGAACTCTATGAGTCTTTGAAGAGAAATTGTAAAGGAGAATATATACATGTTGATTCTAGAAATGAGTTGTGTTTAAGAGATCTCAACTATTATGATGAGTGCCTTTCAGGAATTAACACATTCTACATTTTGGATATCTATTGCAAAAATTATTCTCCTGAAAAACATGAAGCACCATGGAGTAGATCTCTGACTCAAAAGTTTGAGTCCTCTCTCAATTCTCATCTTACAGTGTTTGACACAAGATGCCAAACATATGGTTTTTTCCTTGCTACTCAATGGGCCAATGATGAGAACGTTCGCAAATCGCTTCACATTCGAGAGGGAACAATAGGCAAATGGGAACGTTGTAACACGACTGATTTTGAGTTTCAGATCTCTAGTAGCTTCGAGTTTCATTTAAATCTCAGTGCTAAAGGATACCGTTCTTTAATATATAGTGGGGATCATGACGCAGTTGTTCCTTTCATGTCGACTCAAGCATGGATCAGAGCTCTAAACTACTCCATTGTAGAAGATTGGAGGCCATGGCTTCTAGAAGGACAAGTTGCAGGATACACAAGGACGTACTCTAATCAAATGACATTTGCAACTGTGAAGGGTTCAGGACACACAGCTCCTGAGTACAAGCCCGATGAAGGTTATGCCATGTTCACTAGGTGGATAGGTAGTAAGCCTTTGTAA 1407 0.3945 MNRICTICFNLHIIFATVLALFSRISFQLGSKVEVLPGFEGPLPFELETGYVGLGETDDDMQVFYYFIKSENEPAKDPLMLWLTGGPGCSSFSGLAFQIGPLIFKHDEYDGSLPNLTLRPQSWTKVCSIIFVDLPFGTGFSYAKNVTAQRKDWKLVHHTHQFLRKWLIDHPEFLSNEFYMGADSYSGIPAPAIVQEISKGNEIGLQPPINLKGYLLGNPITTRKEKNDQIPFAHGMGLISDELYESLKRNCKGEYIHVDSRNELCLRDLNYYDECLSGINTFYILDIYCKNYSPEKHEAPWSRSLTQKFESSLNSHLTVFDTRCQTYGFFLATQWANDENVRKSLHIREGTIGKWERCNTTDFEFQISSSFEFHLNLSAKGYRSLIYSGDHDAVVPFMSTQAWIRALNYSIVEDWRPWLLEGQVAGYTRTYSNQMTFATVKGSGHTAPEYKPDEGYAMFTRWIGSKPL* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01104 468 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 452 IPR001563 GO:0004185|GO:0006508
Lapu10g01104 468 FunFam Serine carboxypeptidase-like 11 27 468 - -
Lapu10g01104 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Lapu10g01104 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Lapu10g01104 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Lapu10g01104 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 435 448 IPR001563 GO:0004185|GO:0006508
Lapu10g01104 468 SUPERFAMILY alpha/beta-Hydrolases 36 467 IPR029058 -
Lapu10g01104 468 FunFam Carboxypeptidase 371 465 - -
Lapu10g01104 468 Gene3D alpha/beta hydrolase 39 467 IPR029058 -
Lapu10g01104 468 Pfam Serine carboxypeptidase 37 464 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01104 Lapu-Chr10 13281867 13288061 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01104 30 56 Calmodulin-binding Proteins AT2G22960 74.074 4.24e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01104 K16296 - gmx:100780069 835.099