Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01100 ATGAATCCACACCTTGCGGGATTTTCTGGTTTAACAAATGAGGTTGGGTTGCGAAATCAATCTTTGCCAATTCTTCAAAATCAGAGATTTGATAACCGACCCAGATTTGAAAATCTCTTCTTTGATCAAAGTAGGAAATTTGATTATCTTCAATCTGATCCTAATTCAATACCACCAGAGACATCTTCATCCTCCACTGTTACCCATGAGCAGCACGCTCCAGAGGACTGTGATTTTTCTGATGCACTTTTGAGTTACGTCAGCCAGATCCTAATGGAGGAAGATATGGATGACAAGACATGCATGCTTCAAGATTCTTTAGACATTCAAGCGGCTGAAAAATCGTTCTATGAGGTGCTGGGTGAAAAATACCCACCTTCTCCAAGAAATCCAAGCCTTATCAATGATAAGGTTGGAGGCTATGGCAATTGTCATGATACTAATGGGGATCTAATGGGCACTTTGACCAACCATTTTTTGCCACCGAACTCGAGTAACTTTCCTGAACATGTTCGTGGTAACAGCCTTGTACATTCATCTTATAACCCTTATAATAGTGTAATGGAAGGACCAGTAGATTGTCAAAACAGTATTGTTCAGGTTCCTGATTTGAGAAGTGAAAGTCAATCCATTTGGAAATTTCAGAAAGGAGTTGAGGAGGCTAGTAAATTTCTTCCTTGTGCAAATAGTCTGTTTGCTAATTTGTCACAAATTGAGTCAAAAGTGGAAAAGGATGAATTGTCATACAAAATGGAGGAGGAGAGTGGAGAATGTGTTCATGGCGGATCCAAGGGAAGGAAACATCCTCAAATGGATGAAACAAATGTGGAAGAAAACAGAAGCAGCAAGCTGGCGGCAATTTATTCTGAACCAGCATTGCGGTCAGATATGGCTGATATAATCTTGCTTCATAGCACTGGGGATGGTAAGAGACACTATATGGCTCGCCTCGAGGCTTTGCAGAACAAGACTCAGAAGACAGTGTTGCCAAAAGTTCGATCAAAAGCATCCAGCAGTGAGAAGGGGCGAGGTAAGAAACAAGGTGGGAGGAAGGAAGTGGTCGATTTGAGAACACTTCTGGTTCTGTGTGCACAAGCTGTTGCAGCAGATGACCGCAGGAATGCCAATGAGTTGCTAAAGCAGATCAGGCAACACTCAACCCCTTTTGGAGATGGAAATCAGAGGTTGGCTCATATATTTGCTGATGGCCTTGAGGAGCGTTTGGCAGGTAGTTGCAGCCTTTACAAAGGACTTGTTGGCAGAAGAACATCCGCTGCTAATTTTCTAAAAGCTTATCATCTATACCTTGCTGCATGCCCCTTTAGGAAAATTTCTAACTTTACCTCAAACATCACAATAAGAGAATCTTCAGAACAGTCAATGAGGGTCCATGTTATAGATTTTGGCATCCTTTATGGTTTCCAATGGCCCACTTTTATACAGCGGCTTTCATGGAGAGCAGGAGGACCACCAAAGCTACGGATCACAGGAATAGACTTTCCCCAACCCGGTTTCAAGCCAGCAGAAAGAGTCATAGAAACGGGACGTCGCTTGACAGCTTATGCTGAGGCCTTTAATGTTCCATTTGAGTACAAAGCCATAGCGAAAAAATGGGACACAATTCAACTTGAGGAGCTTGAAATTGATAGGGATGAGTTCCTTGTTGTTACTTGTTTCTATAGAAGCAAGAACTTACTGGATGAATCTGTGTCAGTGGAAAGTCCACGAAATAACTTCCTCAGCCTCATTAAGAGGATCAACCCAAAATTGTTCATTCATGGCATCATGAATGGGGCGTTCAATGCCCCTTTCTTTGTTACCAGATTCCGGGAGGCATTGTTTCACTACTCATCACTGTTTGACATGCTTGAGACTATTGTGCCTCGGGAGGACTGGGAGAGGATGCTGATAGAGAAAGAGATATTCGGGAGGGAAGCATTGAATGTCATAGCTTGTGAAGGGTCTGAAAGAGTGGAGAGGCCAGAGAGCTATAAACAATGGCAGGCACGCATTCTGAGGGCTGGCTTTGTGCAACAATCTTTTGATCGTGAGACAGTGAAGATGGCAATGGAGAAAGTGAGAGGTAGCTACCACAAGGATTTTTTAATTGATGAAGATAGCCAGTGGTTGTTGCAAGGTTGGAAGGGGCGTATCATCTATGCCCTTTCTTGTTGGAGCCCTGCATCATGA 2190 0.4311 MNPHLAGFSGLTNEVGLRNQSLPILQNQRFDNRPRFENLFFDQSRKFDYLQSDPNSIPPETSSSSTVTHEQHAPEDCDFSDALLSYVSQILMEEDMDDKTCMLQDSLDIQAAEKSFYEVLGEKYPPSPRNPSLINDKVGGYGNCHDTNGDLMGTLTNHFLPPNSSNFPEHVRGNSLVHSSYNPYNSVMEGPVDCQNSIVQVPDLRSESQSIWKFQKGVEEASKFLPCANSLFANLSQIESKVEKDELSYKMEEESGECVHGGSKGRKHPQMDETNVEENRSSKLAAIYSEPALRSDMADIILLHSTGDGKRHYMARLEALQNKTQKTVLPKVRSKASSSEKGRGKKQGGRKEVVDLRTLLVLCAQAVAADDRRNANELLKQIRQHSTPFGDGNQRLAHIFADGLEERLAGSCSLYKGLVGRRTSAANFLKAYHLYLAACPFRKISNFTSNITIRESSEQSMRVHVIDFGILYGFQWPTFIQRLSWRAGGPPKLRITGIDFPQPGFKPAERVIETGRRLTAYAEAFNVPFEYKAIAKKWDTIQLEELEIDRDEFLVVTCFYRSKNLLDESVSVESPRNNFLSLIKRINPKLFIHGIMNGAFNAPFFVTRFREALFHYSSLFDMLETIVPREDWERMLIEKEIFGREALNVIACEGSERVERPESYKQWQARILRAGFVQQSFDRETVKMAMEKVRGSYHKDFLIDEDSQWLLQGWKGRIIYALSCWSPAS* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01100 729 MobiDBLite consensus disorder prediction 255 279 - -
Lapu10g01100 729 MobiDBLite consensus disorder prediction 50 74 - -
Lapu10g01100 729 Pfam GRAS domain family 356 725 IPR005202 -
Lapu10g01100 729 ProSiteProfiles GRAS family profile. 347 726 IPR005202 -
Lapu10g01100 729 MobiDBLite consensus disorder prediction 336 350 - -
Lapu10g01100 729 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 275 720 IPR005202 -
Lapu10g01100 729 MobiDBLite consensus disorder prediction 327 350 - -
Lapu10g01100 729 MobiDBLite consensus disorder prediction 50 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01100 Lapu-Chr10 13240616 13244123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01100 75 729 GRAS Transcription Factor Family AT2G37650 54.532 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu10g01100 GRAS 6.7e-113 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01100 - - gmx:100780785 1222.99