Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01095 ATGGTGACTGAATTTTTGATAACTTGTTTTGGTATGTATGCAGGGTTCACTTCTAGAAGTGTGAGTAGAGAGGGCTATGACATCCATTCTAGTAGCAGGAATTCATCAGCCTCCATACCCATGACCCCTCGGAGCGAGGGTGAGATCTTACAATCTTCCAATTTGAAAAGCTACAGCTACAATGAGCTAAGAATAGCAACAAAACATTTCAGCCCAGACAGTGTCTTGGGGGAAGGTGGATTTGGTTCAGTTTTTAAGGGTTGGATTGATGAGCATTCGCTTTCTGTTACCAGGCCGGGAATAGGCATGGTTGTTGCTGTGAAGAGACTTAACCAAGAGGGGTTCCAGGGTCACAAGGAATGGCTGGCTGAAATAAACTATCTTGGGCAACTGCAGCATCCTAATCTTGTCAAGTTGATAGGTTACTGCTTAGAGGATCAGCACAGGCTTCTAGTTTATGAATATATGCCAAAGGGCAGTGTGGAGAATCATCTATTCAGGAGTCAGTACCATGTTGAAGATAACATCATTAATGCAGGGGGGTCTCATTTCCAACAGCTTTCTTGGACTTTAAGATTGAAAATATCCCTTGGGGCTGCTAGGGGTCTTGCTTTTCTCCATAACTCAGAAACTAAAGTCATATACCGAGACTTTAAGACTTCTAATATCCTGCTTGATACGAACTATAATGCCAGACTTTCTGATTTTGGGCTGGCCAGAGATGGACCAACTGGTGATAAGAGCCATGTTTCTACAAGGGTCATGGGAACACATGGATATGCAGCACCAGAGTATCTGGCAACAGGTCACCTCACTGCCAAGAGTGATGTGTATAGTTTTGGAGTGGTTCTTTTGGAAATGTTATCAGGAAGACGTGCCATAGACAAGAATCGACCATCTGGAGAACAATGCTTAGTTGAATGGGCAAAACCTTACCTTGCTAACAAACGAAGGGTTTTTCGTGTGATGGATACTCGCCTTGAAGGTCAGTATTCCCTTAGCCAAGCTCAAAGAGCAGCCACACTTGCTTTTCAATGTCTTTCTGTAGAGTCCAAATACAGGCCAAACATGGATGAGGTGGTGAGAGTGTTGGAGCAACTACGTGAGTCAAATGATAAAGTGAAAAATGGTGATCACAAAAAGCGTAGAGTAAGTGGCTCTGGCCATGGCCATCCCAATGGACTCCATGCATCTGCTAACACAGGAAGTTCTGATGGTCCAAAGAAGTTTTCTTATCCAAGGCCTTCTCCTTCTCTCCTTGATGCCTAA 1269 0.4389 MVTEFLITCFGMYAGFTSRSVSREGYDIHSSSRNSSASIPMTPRSEGEILQSSNLKSYSYNELRIATKHFSPDSVLGEGGFGSVFKGWIDEHSLSVTRPGIGMVVAVKRLNQEGFQGHKEWLAEINYLGQLQHPNLVKLIGYCLEDQHRLLVYEYMPKGSVENHLFRSQYHVEDNIINAGGSHFQQLSWTLRLKISLGAARGLAFLHNSETKVIYRDFKTSNILLDTNYNARLSDFGLARDGPTGDKSHVSTRVMGTHGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAIDKNRPSGEQCLVEWAKPYLANKRRVFRVMDTRLEGQYSLSQAQRAATLAFQCLSVESKYRPNMDEVVRVLEQLRESNDKVKNGDHKKRRVSGSGHGHPNGLHASANTGSSDGPKKFSYPRPSPSLLDA* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01095 422 ProSitePatterns Protein kinases ATP-binding region signature. 76 108 IPR017441 GO:0005524
Lapu10g01095 422 Pfam Protein tyrosine and serine/threonine kinase 74 363 IPR001245 GO:0004672|GO:0006468
Lapu10g01095 422 Gene3D Transferase(Phosphotransferase) domain 1 156 389 - -
Lapu10g01095 422 CDD STKc_IRAK 76 367 - -
Lapu10g01095 422 ProSiteProfiles Protein kinase domain profile. 70 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01095 422 PANTHER OS01G0588500 PROTEIN-RELATED 34 368 - -
Lapu10g01095 422 MobiDBLite consensus disorder prediction 371 422 - -
Lapu10g01095 422 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 156 378 - -
Lapu10g01095 422 Gene3D Phosphorylase Kinase; domain 1 45 155 - -
Lapu10g01095 422 SUPERFAMILY Protein kinase-like (PK-like) 36 364 IPR011009 -
Lapu10g01095 422 FunFam Serine/threonine-protein kinase BIK1 37 155 - -
Lapu10g01095 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01095 Lapu-Chr10 13167002 13170346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01095 7 364 Glycoside Hydrolase AT3G07070 42.781 8.31e-99 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lapu10g01095 PK_Tyr_Ser-Thr 3.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01095 - - gmx:100795058 711.064