Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01082 ATGGGCAACCACGTAGGAACAGCCTGCCTCTGCTCTGCCGGTGCCGGAGATATATCCCGCCGGCACCATCATAGCAATGGCAACCCCTTTGGAAACTCAATATGCTACATTCGACCGCCGGACCTTTTCGCTGACGCCGACGTCACCGCCTTCACAACTTTCCGATCAGTTTCCGGCGCCTCCGTCAGCGCCAACTCCTCTACCCCTCCTTCCACCACCTTCGATTCTCTCCACCACAGCGCCACCAATTCCACCGTCGTGTTGGACTCCTCGGCGTCGTTTGAGAGCTCCCCATCGTTCACGTCGATGCCTCTGCAGCAGCAACACGCTTCGTGTCGGGCTGGATCCTCTGCCGGAAGCTGCAACCCTGTTTGGCGGAGCCCCACGGAGAGAGGGTTCTCTTCGGGCCCTGTGGTGCTTGGTGGTTTGATGAATGTAAGAAGTTTGACGAATGAAAGAGGTTGGAAAAAGAAGCTGTGGAGAAGCTTCTCTCATGACAACGGGTCTGGGTTTGAGGACAAAAGTAAGAAACAAAGCGTGAGGAAGACTCTCAAGAGGGTGATTTCTGGGTCCTTTGTCAAAGGGGTGGCTTCAATTGGAGGGCACAAGAAAAAGAATGAAAATGGTATCCGTAAGGTTTGTGGTGCTGATGCTGAGGAAAGTTTTAATGCTGGTGGTGACGATGATCATCATCCTCATTTAGATGATCATCATTCTTATTTAAGTGATGATAATGAAAATTTTAACATTGTTGGAAATTGTTGCAGTGACTTCAAAAATCTTGACTTTATGGCCTCGATTACGGTTGCAGACCGTGATTTGATAGGATGTGAAAATCTAGAATGGGCTCAAGGGAGAGCAGGTGAAGATCGTGTGCATATTGTGATTTCTGAGGACCATGGGTGGGTTTTTGCTGGAATCTATGATGGATTCAATGGTCCCGATGCTACTGATTATCTTCTTGATAATCTTTTCTATTCTGTGCATGATGAGCTCAAGGGTATGCTATGTGGCGACAGGTCGGAGGAATTCATGGGGATGGAGGAGAAAGTGTTGTTGGGTTTGGTTAAGGGTAGTGGTAGATCCTCCAAATTAAGAAATAGAATGGTCAAAGGTTGTTGTTCTTCGGTATTGGATAAAGAAAACAGTACACTGGTGAATCAAATGGCAAATTTGGATTCTTTGAATGGTCCAAAGAAAATGGGGGGATTGAACAGTAGAAATGATTGTGAAGAGTTGATGCAGTTAGAGATAACTGGTAAAGGTGCATCAACTTTTGGCCACTCAGATGTGTTGCTAGCTCTTTCTGAGGCGTTGAGGAAGACTGAGGATGCGTTTCTGAAGAAAGTTGATGAAGTGATAGGTAATAATCCTGTGTTGACTATGATGGGGTCTTGTGTTTTGGTGATGCTGATGAAGGGAGAAGATGTTTATTTGATGAATGTGGGAGACAGTCGTGCAGTATTGGCCACTCACAGTGCTAATTCTCTTCAGCTGACCATGGAGCATAGCACACTTGTGAAAGAGGAGGTTCACAGAATCAGGAAGGAGCACCCAGATGACCCTTCTGCAATTACTAAAGGCCGGGTGAAAGGTTACTTAAATGTTACAAGAGCTTTTGGGGCTGGCTTCCTGAAGCATCCTAAACAGAATAATGCAGTGTTAGAGACTTTCAAAGTTAACTACATAGGGGACTCTCCATACATCATATGTTCCCCTTCACTCTCCCACCACAGGCTCAGCTCAAGTGACAGATTCTTGATATTGTGTTCTGATGGACTCCACCAATACTTCACAAACCAAGAAGCAGTTGCCATAGTGGACTCATTCATCACTTCCTCTCCAGATACAGATCCTGCACAACTCCTCATAAATGAAGCACTTCTTCGAGCTGCCAAAAAAGCTGGTATGGACTTGTATGAACTGCTGAATATCCCACAAGGGGAACGACGTCTTTATCATGATGACATTTCAGTTGTCATAGTCTCCTTCAAGGGAAAAATATGGCGTTCATCACTTTAA 2022 0.4585 MGNHVGTACLCSAGAGDISRRHHHSNGNPFGNSICYIRPPDLFADADVTAFTTFRSVSGASVSANSSTPPSTTFDSLHHSATNSTVVLDSSASFESSPSFTSMPLQQQHASCRAGSSAGSCNPVWRSPTERGFSSGPVVLGGLMNVRSLTNERGWKKKLWRSFSHDNGSGFEDKSKKQSVRKTLKRVISGSFVKGVASIGGHKKKNENGIRKVCGADAEESFNAGGDDDHHPHLDDHHSYLSDDNENFNIVGNCCSDFKNLDFMASITVADRDLIGCENLEWAQGRAGEDRVHIVISEDHGWVFAGIYDGFNGPDATDYLLDNLFYSVHDELKGMLCGDRSEEFMGMEEKVLLGLVKGSGRSSKLRNRMVKGCCSSVLDKENSTLVNQMANLDSLNGPKKMGGLNSRNDCEELMQLEITGKGASTFGHSDVLLALSEALRKTEDAFLKKVDEVIGNNPVLTMMGSCVLVMLMKGEDVYLMNVGDSRAVLATHSANSLQLTMEHSTLVKEEVHRIRKEHPDDPSAITKGRVKGYLNVTRAFGAGFLKHPKQNNAVLETFKVNYIGDSPYIICSPSLSHHRLSSSDRFLILCSDGLHQYFTNQEAVAIVDSFITSSPDTDPAQLLINEALLRAAKKAGMDLYELLNIPQGERRLYHDDISVVIVSFKGKIWRSSL* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01082 673 SMART PP2C_4 273 662 IPR001932 -
Lapu10g01082 673 CDD PP2Cc 429 664 IPR001932 -
Lapu10g01082 673 ProSiteProfiles PPM-type phosphatase domain profile. 274 664 IPR001932 -
Lapu10g01082 673 PANTHER PROTEIN PHOSPHATASE 2C 246 663 IPR015655 GO:0004722|GO:0006470
Lapu10g01082 673 SUPERFAMILY PP2C-like 286 665 IPR036457 -
Lapu10g01082 673 Pfam Protein phosphatase 2C 442 633 IPR001932 -
Lapu10g01082 673 Gene3D - 264 670 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01082 Lapu-Chr10 12964980 12968067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01082 1 671 PP2C-type Phosphatase Gene Family AT1G07630 41.962 8.43e-167 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01082 - K01102 gmx:100794388 587.415