Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01079 ATGGCGTTGTTGTATTTGGCTCTGCTAAGTCTGGTTTTTGTGTTTTGTGGGAAGCTCTTGTTCCAAACAAGAAGATTCAGAAACCTTCCTCCAGGGCCATTTTCATACCCTATAATCGGAAACCTCCTCCAACTCAAACAGCCTTACCACCGCACTTTCACTCAAATGACGCAAAAATACGGCCAAGTCTTCTCTCTCTGGTTCGGTTCCCGTCTCGTTGTTGTCCTTTGTTCACAATCCGCCGTCCAAGAATGCTTCACCAAAAACGACATCGTCCTCGCCAACCGACCTCACTTTCTCTTTGGCAAATACATCAGCTACAACAACAGCACCATCCTTCACTCCTCCTACGGCGACCACTGGCGCCATCTCCGCCGCATCTTGTCCCTCGAGGTCGTCTCCTCCAACCGCTTAAACTCCTTCTACGATGTCCGCAGGGACGAGATCATGAGGCTCGTCAAGAAGCTCGCTCACCTCTCACGCAACCACTTCGCCAAAGTCGATCTTAAATCTATGTTTATGGAAACGTCATTTAATACTATGATGCGGATCGTGTCTGGAAAGAGATTATTTGGTGATGACTGTGATGTAAGTGATGTCGAGAAAGCAAAACAATTCAAAGAAATCATTAAAGAGTTAGTAATATTAGCGGGAGTAAATAACCGTGGAGACTTCTTACCTTTCATAAGATGGTTTGACTTTGATAATCTGGAGAAGAAATTGAAAGGGATTGGTAAGAGAACTGATGCTTTCTTGCAAGAACTCATTGAGGAACATCGTAGTATTGGGAATCACAATGCCAATACTATGATAGCTCATCTCCTTGCCCAACAACGATCACAACCAGAACAATACACTGATCAAATCATCAAAGGACTTTGTCTGAGCATGTTGCTTGCAGGAACAGATACATCAGCTCTAACTTTAGAATGGGCAATGGCTAATTTATTGAACCATCCAGAAGTTATAAAGAAGGCAAAAAATGACATAGACACTCACGTTGGACCAAATCGTCTCGTAGATGAATCTGATATGTCAAAACTTCCTTATATTCAATGTATTGTTTACGAGACACTTCGATTGCATCCTGCTGCTCCAATTTGGTCGCCACATTTGTCTTCTGAAGATTGCACTGTAGGAAAATATAATCTTCCAAAAGACACAATTGTGTTAGTGAATGCATGGGCTGTTCATATGGATCCAAAAGTGTGGAGTGACCCAACACACTTTCAGCCTGAAAGGTTTGAGAAAGAAAGTGAAGCAAGCAGGTTACTTTCATTTGGGTTAGGAAGGAGATCTTGCCCTGGATCAAACTTGGCTCAACGTACTGTGAGTTTATCTGTGGCCTTACTGATTCAATGTTTTGAGTGGAAACGAATTAGTGAGGAAGAAATTGATATGTCCGAGGCAAATGGAATTACTATATCGAGAAAAAATCCATTGGAAGCTATGTGTCAACTCCGTCCATTACCAGCACTTAAAGGACATGTACTAATCTATGGTGTTATTTAA 1512 0.422 MALLYLALLSLVFVFCGKLLFQTRRFRNLPPGPFSYPIIGNLLQLKQPYHRTFTQMTQKYGQVFSLWFGSRLVVVLCSQSAVQECFTKNDIVLANRPHFLFGKYISYNNSTILHSSYGDHWRHLRRILSLEVVSSNRLNSFYDVRRDEIMRLVKKLAHLSRNHFAKVDLKSMFMETSFNTMMRIVSGKRLFGDDCDVSDVEKAKQFKEIIKELVILAGVNNRGDFLPFIRWFDFDNLEKKLKGIGKRTDAFLQELIEEHRSIGNHNANTMIAHLLAQQRSQPEQYTDQIIKGLCLSMLLAGTDTSALTLEWAMANLLNHPEVIKKAKNDIDTHVGPNRLVDESDMSKLPYIQCIVYETLRLHPAAPIWSPHLSSEDCTVGKYNLPKDTIVLVNAWAVHMDPKVWSDPTHFQPERFEKESEASRLLSFGLGRRSCPGSNLAQRTVSLSVALLIQCFEWKRISEEEIDMSEANGITISRKNPLEAMCQLRPLPALKGHVLIYGVI* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01079 503 Pfam Cytochrome P450 30 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01079 503 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01079 503 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01079 503 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01079 503 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01079 503 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01079 503 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01079 503 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01079 503 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01079 503 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01079 503 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01079 503 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01079 503 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01079 503 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01079 503 Gene3D Cytochrome P450 22 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01079 503 SUPERFAMILY Cytochrome P450 30 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01079 503 PANTHER CYTOCHROME P450 82C3-RELATED 16 488 - -
Lapu10g01079 503 CDD CYP81 61 481 - -
Lapu10g01079 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Lapu10g01079 503 FunFam Cytochrome P450 family protein 21 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01079 Lapu-Chr10 12871372 12873947 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01079 4 489 Cytochrome P450 AT4G37370 51.837 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01079 K13260 - gmx:100811727 732.635