Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01078 ATGGCGCTGTTGTATTTGGCTCTGCTAAGTCTGGTTTTTGTGTTTTGTGGGAAGCTCTTGTTCCAAACAAGAAGATTCAGAAACCTTCCTCCAGGGCCATTTTCATACCCTATAATCGGAAACCTCCTCCAACTCAAACAGCCTTACCACCGCACTTTCACTCAAATGACGCAAAAATACGGCCAAGTCTTCTCTCTCTGGTTCGGTTCCCGTCTCGTTGTTGTCCTTTGTTCACAATCCGCCGTCCAAGAATGCTTCACCAAAAACGACATCGTCCTCGCCAACCGACCTCACTTTCTCTTTGGCAAATACATCAGCTACAACAACAGCACCATCCTTCACTCCTCCTACGGCGACCACTGGCGCCATCTCCGCCGCATCTTGTCCCTCGAGGTCGTCTCCTCCAACCGCTTAAACTCCTTCTACGATGTCCGCAGGGACGAGATCATGAGGCTCGTCAAGAAGCTCGCTCACCTCTCACGCAACCACTTCGCCAAAGTCGATCTTAAATCTATGTTTATGGAAACGTCATTTAATACTATGATGCGGATTGTGTCTGGAAAGAGATTATTTGGTGATGACTGTGATGTAAGTGATGTGGAGAAAGCAAAACAATTCAAAGAAATCATTAAAGAGTTAGTAATATTAGCAGGAGTAAACAACCGTGGAGATTTTTTGCCTTTTGTAAGGTGGTTTGATTTTGACAATCTAGAGAAGAAGCTCAAAGGAATTGGTAAGAGAACTGATGCATTCTTGCAAGAACTAATTGAGGAACATCGTAATATTGGCAATCACAATGCCAATACTATGATAGCTCATCTCCTTGCTCAACAACGATCACAACCTGAACAATACACTGATCAAATCATCAAGGGACTTTGTCTGAGCATGTTACTTGCGGGAACAGATACATCAGCTTTAACTTTAGAGTGGGCAATGGCTAATTTATTAAACCATCCAGAAGTTATAAAGAAGGCAAAAAATGACATAGACACTCACGTTGGATCAAATCGTCTCGTAGATGAATCTGATATGTCGAAACTCCCTTATATTCAATGTATTGTTTATGAGACACTTCGATTGCATCCTGCTGCTCCAATTTGGTCACCACATTTGTCTTCAGAAGATTGTACTGTAGGAAAATATAATCTTCCAAAAGACACAATTGTGTTAGTGAATGCATGGGCTGTTCATATGGATCCAAAAGTGTGGAGTGACCCAACACACTTTCAGCCTGAAAGGTTTGAGAAAGAAAGTGAAGCAAGCAGGTTGCTTTCATTTGGGTTAGGGAGGAGATCTTGTCCTGGATCAAACCTGGCTCAACGTACAGTGAGCTTATCTGTGGCCTTATTGATTCAATGTTTTGAGTGGAAACGAATTAGTAAAGAAGAAGTTGATATGTCTGAGGCAAATGGAATTACTATATCAAGAAAAAATCCATTGGAAGCTATGTGTCAACTCCGTCCATTGCCAGCAGTTAAGGATATGTAG 1491 0.4212 MALLYLALLSLVFVFCGKLLFQTRRFRNLPPGPFSYPIIGNLLQLKQPYHRTFTQMTQKYGQVFSLWFGSRLVVVLCSQSAVQECFTKNDIVLANRPHFLFGKYISYNNSTILHSSYGDHWRHLRRILSLEVVSSNRLNSFYDVRRDEIMRLVKKLAHLSRNHFAKVDLKSMFMETSFNTMMRIVSGKRLFGDDCDVSDVEKAKQFKEIIKELVILAGVNNRGDFLPFVRWFDFDNLEKKLKGIGKRTDAFLQELIEEHRNIGNHNANTMIAHLLAQQRSQPEQYTDQIIKGLCLSMLLAGTDTSALTLEWAMANLLNHPEVIKKAKNDIDTHVGSNRLVDESDMSKLPYIQCIVYETLRLHPAAPIWSPHLSSEDCTVGKYNLPKDTIVLVNAWAVHMDPKVWSDPTHFQPERFEKESEASRLLSFGLGRRSCPGSNLAQRTVSLSVALLIQCFEWKRISKEEVDMSEANGITISRKNPLEAMCQLRPLPAVKDM* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01078 496 Pfam Cytochrome P450 30 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01078 496 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01078 496 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01078 496 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01078 496 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01078 496 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01078 496 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01078 496 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01078 496 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01078 496 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01078 496 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01078 496 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01078 496 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01078 496 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01078 496 Coils Coil 493 496 - -
Lapu10g01078 496 Gene3D Cytochrome P450 19 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01078 496 PANTHER CYTOCHROME P450 82C3-RELATED 16 488 - -
Lapu10g01078 496 FunFam Cytochrome P450 family protein 21 490 - -
Lapu10g01078 496 SUPERFAMILY Cytochrome P450 30 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01078 496 CDD CYP81 61 481 - -
Lapu10g01078 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01078 Lapu-Chr10 12853564 12855657 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01078 4 489 Cytochrome P450 AT4G37370 52.041 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01078 K13260 - gmx:100811727 738.413