Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu10g01071 | ATGCAGTCTCATGGGGAGGGTTCAATCAGGCCAGGATCCATGGCTGATAGGGCAAGGATGGCCAACATGCCAATGCCAGAGGTTGCACTCAAGTGTCCACGCTGCGAATCCACCAACACCAAATTTTGCTACTTCAACAACTACAGTCTCTCTCAGCCCCGCCACTTCTGCAAGACCTGCAGAAGGTACTGGACCAGAGGTGGCGCCCTAAGGAGCGTCCCCGTCGGCGGAGGCTGCAGGAGGAACAAGCGGAGCAAAGGAAGCGGCGGTGGCGGCGGCTCCAAGTCTCCAGCAAGCTCTGACCGCCAAACAGGAAGTGTCAGTTCCACCAACTCCGTATCTTCCAAGAGTGAGAGAATAGGGCTTGCACCCCAAATTCCACCTCTCAGATTCATGCCTCCATTGCATCAACTCAGTGACTTCGGAGCTGGAGATATTGGCCTAAACTATGGTCTCAGTAATGGCTCAATGGGAGGAGTAGGGGACTTGAGTTATCAAATTGGAGCAAGTGCTTTTGGTGGTGCCTCTTCAATCTTTTCAGCACCTGGTTTGGACCAATGGAGAATGCCGCAGCAGTTTCCCCTCTTCGCTGCCTTGGAAGGTTCATCACCTGCTTCTAATGTATACCCTTTTGAAGGAAGTGCTGAGGTGAGTGGATTCATGAGGCCAAAGGTTTCAACTTCTGGGATCATGACTCAGCTAGCTTCAGTCAAAATGGAAGATAGTAGAGAACCTAACTTATTGTCAACCCAGTTCTTGGGAAACAATAATCCAGTGAGTGAACAATACTGGACCAGTGCTAATTCTGCATCATGGACAGATATTTCTGGTTTTAGCTCTTCTTCCACTACTAATAACCATCTATAG | 867 | 0.4983 | MQSHGEGSIRPGSMADRARMANMPMPEVALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSKGSGGGGGSKSPASSDRQTGSVSSTNSVSSKSERIGLAPQIPPLRFMPPLHQLSDFGAGDIGLNYGLSNGSMGGVGDLSYQIGASAFGGASSIFSAPGLDQWRMPQQFPLFAALEGSSPASNVYPFEGSAEVSGFMRPKVSTSGIMTQLASVKMEDSREPNLLSTQFLGNNNPVSEQYWTSANSASWTDISGFSSSSTTNNHL* | 289 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu10g01071 | 288 | MobiDBLite | consensus disorder prediction | 74 | 119 | - | - | |
Lapu10g01071 | 288 | ProSitePatterns | Zinc finger Dof-type signature. | 32 | 68 | IPR003851 | GO:0003677|GO:0006355 | |
Lapu10g01071 | 288 | ProSiteProfiles | Zinc finger Dof-type profile. | 30 | 84 | IPR003851 | GO:0003677|GO:0006355 | |
Lapu10g01071 | 288 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 22 | 129 | IPR045174 | GO:0003700|GO:0006355 | |
Lapu10g01071 | 288 | Pfam | Dof domain, zinc finger | 29 | 84 | IPR003851 | GO:0003677|GO:0006355 | |
Lapu10g01071 | 288 | MobiDBLite | consensus disorder prediction | 92 | 119 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu10g01071 | Lapu-Chr10 | 12719149 | 12720157 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu10g01071 | 2 | 284 | C2C2-Dof Transcription Factor Family | AT3G55370 | 40.594 | 4.24e-54 | 178 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Lapu10g01071 | zf-Dof | 4.9e-32 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu10g01071 | - | - | pvu:PHAVU_010G013500g | 485.723 |