Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01059 ATGACACAGGCAGTGGGGCGGAGCAGGGTGGTCGGAGAATACGTGGTGGGGAGGCAAATCGGCGCGGGGTCGTTCTCGGTGGTGTGGCACGGAAGGCACAAGGTGCACGGAACCGAGGTGGCAATAAAGGAGATCGCCATGCTTCGCCTCAATAAGAAGTTGCAGGAGAGCCTCATGTCCGAGATTTTCATCTTGAAGCGGATTAACCACCCTAACATAATCTGTTTGCACGATATCATTCAGGTTCCTGGGAAGATACATCTTGTGTTAGAATACTGTAAAGGGGGAGATCTGTCCTTGTACATTCAACGCCATGGAAGGGTACCAGAGGCAACTGCAAAGCATTTTATGCAGCAGCTGGCTGCTGGTCTACTAGTTCTTCGTGATAATAACCTTATCCATCGAGACTTGAAACCACAGAACCTTCTTCTCTCCCAAAATGATGAGAAGTCAGTGCTGAAGATTGCTGACTTTGGATTTGCAAGATCTCTGCAACCCAGGGGCCTTGCTGAAACCTTGTGTGGTTCACCTCTCTATATGGCTCCAGAAATCATGCAACTACAGAAGTACGATGCTAAGGCAGATCTCTGGAGTGTTGGTGCAATCTTATTTCAGCTGGTTACAGGAAGAACACCTTTTACTGGGAACAATCAAATACAGTTACTACAGAATATTTTGAAATCGACAGAATTGCAGTTTCCATCTGATAGCCCAAGTCTGAGTTTTGAGTGCAAAGATTTGTGTCAGAAATTGCTACGGCGGAATCCAGATTGCTTTTGGTTAGCATCAGCATGGCAGCTCCTTCACAAAATTGAGCTGACAAATCTGTTGGAACGTCTAACTTTTGAAGAATTTTTTAACCACCCATTTCTTTCTCAGAAGCAAAGAGAACACGATGATGAGCCATTGAGGAGTAGAAGTTCTTCAAGGCTGGTTGGTGGGATTTGTTCTACAGTGTCTGATCCTTTGAGAAGAACTGAGGAAAATTACCAAGAAGATTGTTTGCCTTTTATCCTAGATGACGACTCTGGTGGCCCTGAGGGGAGTCCATCCTTTTCAAGAAAAAAGTCCTCAATAAAGTCCACCTATGGATTTGATCTAAATTCTAAACTAGATAAAGCAGAGTCAGCATCTCCTATGACTAATAACATAAATTCTAATTCTGGATTTGGTAGTATGACACAAAGATCTGAAATCACTACTAGAAGATTAGACAACCATAACATTTCGAGAAATTTCAGTGATCCTCTAGAATCTCCAGAACAGATGTTCGCAAGTCCTTATCCAAGAGTTACAGATTCCCTGGAGAATATTGATCAAGAATATGTTCTGGTGCCAGGGCCCCCCATAGATGTTTCATCTTCTTCACTGGGTGCTTCAAGGCCCAGCCATACCCCATATAGGTCTGGTAGTTTACCCCAAGAGTCTTGTAGTACAATCACCATACCAAGTGCTCCAATGCCAATAGTTGGTGTACATACAAATAGCATGTACCAAGTTGGAAGTTCAGGAAGTCAGGACTCTGCTCCTGGGACTTCGCTTGGATCAATGGATATAGGTGATGAACAGCCATCAGCTCACTGCATGACTAGGGTAAAATCATTGCAACAGTGTGCATCTGCCATCACCGAGTTAGTTAATGAAAAGATGAAGGCAGGAAAGCATCTAGAAGCATTTTCTATTCAGCTTGTAATTCTTGCAATCTGGAAGCAAGCACTGCACATATGCCATACACAAGCTGCCTCAGCTATGGAAGGAAGTCCAAATCAAGAAACTTCAAGATATAGAAGGAGTGCCAGCAGGAAGCATGGCAGTCCTGATTCAGAAGAATGCCTTGATGGAAACACCCTAGGGCCAAAGGATATATTATCTAAAATTGAAAGTGAATTTTTGAGGGAATTTGAGCATGCTGAAGAACTTGCCAAGACCATTGAGCCTGGAAACACTGAGATGCCAGATGCAATGGAGACAATATTTCAATCTGCCCTTGCTTTTGGAAGGCATGGGGGTGTAGAAGAACTCATGGGTGACATGGAAAGTGCAGCTGCATTGTATTCAAAAGCTGTCCGTCTGTTAGTTTTCCTTCTAGTGGAAGGACCATCCCTGATTCTTAATCCTCCGTTTTCACTGACAAACTCAGATCGTTACAGACTTCGAAATTACATTGATATTCTTAATAACAGACAAGGTTATTCAAGGTCCCAGCGAATGGCACTACTAAAATGTGATGACAGTCAAGGTATCCTAAAGGATAAATTTTAG 2262 0.4328 MTQAVGRSRVVGEYVVGRQIGAGSFSVVWHGRHKVHGTEVAIKEIAMLRLNKKLQESLMSEIFILKRINHPNIICLHDIIQVPGKIHLVLEYCKGGDLSLYIQRHGRVPEATAKHFMQQLAAGLLVLRDNNLIHRDLKPQNLLLSQNDEKSVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNNQIQLLQNILKSTELQFPSDSPSLSFECKDLCQKLLRRNPDCFWLASAWQLLHKIELTNLLERLTFEEFFNHPFLSQKQREHDDEPLRSRSSSRLVGGICSTVSDPLRRTEENYQEDCLPFILDDDSGGPEGSPSFSRKKSSIKSTYGFDLNSKLDKAESASPMTNNINSNSGFGSMTQRSEITTRRLDNHNISRNFSDPLESPEQMFASPYPRVTDSLENIDQEYVLVPGPPIDVSSSSLGASRPSHTPYRSGSLPQESCSTITIPSAPMPIVGVHTNSMYQVGSSGSQDSAPGTSLGSMDIGDEQPSAHCMTRVKSLQQCASAITELVNEKMKAGKHLEAFSIQLVILAIWKQALHICHTQAASAMEGSPNQETSRYRRSASRKHGSPDSEECLDGNTLGPKDILSKIESEFLREFEHAEELAKTIEPGNTEMPDAMETIFQSALAFGRHGGVEELMGDMESAAALYSKAVRLLVFLLVEGPSLILNPPFSLTNSDRYRLRNYIDILNNRQGYSRSQRMALLKCDDSQGILKDKF* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01059 753 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 3 662 IPR045269 GO:0004674|GO:0006914
Lapu10g01059 753 FunFam Aurora kinase A 7 96 - -
Lapu10g01059 753 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Lapu10g01059 753 CDD STKc_ATG1_ULK_like 20 290 - -
Lapu10g01059 753 Gene3D Transferase(Phosphotransferase) domain 1 6 332 - -
Lapu10g01059 753 MobiDBLite consensus disorder prediction 455 475 - -
Lapu10g01059 753 ProSiteProfiles Protein kinase domain profile. 14 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01059 753 MobiDBLite consensus disorder prediction 581 616 - -
Lapu10g01059 753 MobiDBLite consensus disorder prediction 595 609 - -
Lapu10g01059 753 Pfam Protein kinase domain 14 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01059 753 SMART serkin_6 14 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01059 753 FunFam Serine/threonine-protein kinase ATG1 6 269 - -
Lapu10g01059 753 SUPERFAMILY Protein kinase-like (PK-like) 10 466 IPR011009 -
Lapu10g01059 753 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01059 Lapu-Chr10 12466902 12476589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01059 10 301 CBL-interacting serine-threonine protein kinases AT2G30360 35.099 6.42e-50 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Lapu10g01059 Pkinase 6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01059 K08269 - gmx:100791596 1305.81