Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01056 ATGGTTTATGAATGCATGGATAATTTGCTTTGTGATGAGGTGTGGCTTTCGAATTCTGAAAATACCTTTGAAGAAAAAGTTGGTGACTTTGTTTCATTCAAGAGTTATGAGAACAAAGAATTTGAAGAGGCTTTTACACTGTATCTAGAGAAGGAGGTTTCTTCTTTGCCTGAATATGACTATACAAAGTACTTATACTCCAACAATTTGATTCTTCCTCGGTGTAGAGTTATTCAATGGTTTGTCAAGTGTGGAAGTCACTTTAATCTTTCTTTTGGAACAGTCTTCTTGGCTGTTAATTATCTTGATCGTTTTGTATCCATTTGTCAATGCAATGATTGGAAATACTGGATGCTTGAATTGCTTTCTATTGCTTGCATATCAATTGCCATAAAGTTCAACGAGAATTCAGCACTTTCCTTGCATGAAATTCAGGTGGAGGGTTTGGATTACTCATTCCAATCAAAGGTAATTTTGAGAATGGAGCTGATTTTATTGAAGGCATTGGGGTGGCACATTAACTCTGTGACAAGTTATTCTTTTGTGGAAATGGTAGATATTGATTTCATGGAATCTCACCTTTATGAGAAGCTTATTTCACCAGTCACTCAACTCCTTCTCCAAGCTACTTTAGATCAGAAAATGCTGGAATTTAGGCCAAGCATTGTTGGCATATCTGCATTGTGGTGCACTCTAGACCACTTATTTCCACCAGCATCAGATACTTACATTGCTTATATTCTGAGGCTCTTGAGCCAAAATCAGAAGGATGATATCATCAAGTGTCGTGAGTTGATGCAAACACAAACTTCATTGTGCTGTGAAAATCACCACCATTGCCCTTTAAGCCCAACAACAGTTCTGTTGAACACATCCACTCGCATTAATTTATGA 894 0.3714 MVYECMDNLLCDEVWLSNSENTFEEKVGDFVSFKSYENKEFEEAFTLYLEKEVSSLPEYDYTKYLYSNNLILPRCRVIQWFVKCGSHFNLSFGTVFLAVNYLDRFVSICQCNDWKYWMLELLSIACISIAIKFNENSALSLHEIQVEGLDYSFQSKVILRMELILLKALGWHINSVTSYSFVEMVDIDFMESHLYEKLISPVTQLLLQATLDQKMLEFRPSIVGISALWCTLDHLFPPASDTYIAYILRLLSQNQKDDIIKCRELMQTQTSLCCENHHHCPLSPTTVLLNTSTRINL* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01056 297 Pfam Cyclin, C-terminal domain 176 270 IPR004367 -
Lapu10g01056 297 Pfam Cyclin, N-terminal domain 44 174 IPR006671 -
Lapu10g01056 297 PANTHER CYCLINS 40 268 IPR039361 -
Lapu10g01056 297 SMART cyclin_7 79 167 IPR013763 -
Lapu10g01056 297 SUPERFAMILY Cyclin-like 41 174 IPR036915 -
Lapu10g01056 297 Gene3D - 58 174 - -
Lapu10g01056 297 CDD CYCLIN_AtCycD-like_rpt2 176 266 - -
Lapu10g01056 297 Gene3D - 49 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01056 Lapu-Chr10 12410057 12412829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01056 31 235 Core Cell Cycle Gene Families AT1G70210 30.769 3.78e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01056 K18813 - gmx:100792420 401.749