Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01052 ATGGCCAACCTCAACATGCTCCTCAAACTTTTGTCTTTGTTGTTGTTTCTTTTGATCCCAGTTTCATCTCAGCTTGACCAGATCTTCTATGCTGGATTCAAGGGTGTGGATGGCAACAATATGACCCTTAATGGTGTAGCAGAAATAGAGGCAAGTGGGGTACTGAAACTCACAAATGATTCAGGAAAGGTCATGGGTCATGCTTTTTATCCAACTGCTTTTCAGTTCAAGAACTCTAGTGATGGTAAAGCTTTCTCCTTTTCTTCTTGTTTTGCTTTGGCTATTGTTCCTGAGTTTCCAAAGCTAGGAGGGCATGGCCTTGCTTTTACAATTGCAACTTCTAAGGATCTGAAGGCTCTTCCAAGCCAATATCTTGGTCTCCTTAACTCAAGTGACATAGGGAACTTCTCCAACCACCTTTTTGCTGTTGAGTTTGACACAGCCCAAGATTTTGAGTTTGGGGACATCAATGACAACCATGTTGGAATTGACATCAATAGCTTGGTCTCCAATGCTTCTGCACCTGCTGGTTACTACACTGGGGATCATGATTCAGCCAAACAGAATCTCACTCTCAAAAGTGGGCAACCCATTCTAGTTTGGGTTGATTATGACTCTGCTCAAAGTGTTGTTAATGTCACGATTTCTCCATCTTCTACCAAACCCAGTAGGCCACTCTTGTCCTTTCGCGTGGATCTTTCACCAATCCTTAAGGATTCCATGTATGTAGGGTTCTCTGCATCAACAGGTTTGCTTGCTAGCTCCCATTACATCTTGGGTTGGAGCTTCAAAATCAATGGGTCAGCTCCCCCCCTTGATCTCTCTTCCCTGCCACAGCTTCCAGGGCCAAAGAGGAAACACACATCTTTGATAATTGGGGTTTCAGTCTCTGGTGTTGTTCTTGCATTATTTGCTGTCTTACTCGGCTTCTACATGTACAGAAGGTACAAGAATGCTGATGTTATAGAAGCTTGGGAGCTTGAGATTGGACCACACAGGTACTCCTACCAAGAGCTCAAGAAAGCAACTAAAGGTTTTAAGGACAAAGGGCTGCTTGGACAAGGTGGATTTGGGAGTGTCTACAAAGGAACATTACCAAATTCCAACACCCAAGTTGCTGTCAAGAGAATTTCACGTGACTCCAAACAAGGCCTGAGGGAATTTGTATCAGAAATAGCCAGCATAGGCCGACTTCGCCACCGGAATCTGGTTCAGCTGCTGGGGTGGTGTCGCCGCAGAGGTGACCTCCTCCTTGTGTATGATTTCATGGCTAATGGGAGCTTAGACAAGTACCTGTTTGATGAGCCAGAAAGAGTCCTAAGTTGGGAGCAAAGGTTTAAAGTCATCAAGGATGTTGCTTCTGCCCTTTTGTATCTGCATGAGGGCTATGAGCAGGTGGTGATACATAGAGATGTTAAGGCTAGCAATGTGCTGCTAGATGGTGAACTGAATGGAAGACTAGGAGATTTTGGATTAGCAAGGTTGTATGAACATGGTGCTAACCCAAGTACCACAAGGGTGGTGGGGACCTTGGGATATTTGGCACCTGAGGTCCCTAGAACAGGTAAGGCCACTCCTAGCTCAGATGTTTTTGCATTTGGTGCACTTTTACTAGAGGTGGCATGTGGGCTCAGGCCACTTGAGCCTAAGGCAATGCCGGAAGATCTGGTTTTGGTTGATTGTGTGTGGAACAAGTACAAACAAGGGAGAATACTTGATGTGGTGGACCCTAGACTAAATGGTGCTTTCAATGAAAGAGAGATGCTCATGGTGTTGAAATTGGGGCTGCTATGCTCAAATGGCTCTCCTACTGCTAGGCCTAGCATGAGACAGGTGATGAGGTTTTTGGATGGAGAAGTTGGTGTGCCAGAGGAGTTGAAAAGGCCAGGAGAGACAGCTTCACAAGAGGGTTTTGATGAATTCTTGCACTTACTTGAATCTTCTTCTTTTGATCAGATGAGCAGAAGCTCCTATGATAGAAGTAGATACATAGGTGGTAGTTTCCCTTCTTATACTAATACATCTCTTTTTACTCCCCATGCTCAAGGAGAAACAATTTGA 2061 0.4478 MANLNMLLKLLSLLLFLLIPVSSQLDQIFYAGFKGVDGNNMTLNGVAEIEASGVLKLTNDSGKVMGHAFYPTAFQFKNSSDGKAFSFSSCFALAIVPEFPKLGGHGLAFTIATSKDLKALPSQYLGLLNSSDIGNFSNHLFAVEFDTAQDFEFGDINDNHVGIDINSLVSNASAPAGYYTGDHDSAKQNLTLKSGQPILVWVDYDSAQSVVNVTISPSSTKPSRPLLSFRVDLSPILKDSMYVGFSASTGLLASSHYILGWSFKINGSAPPLDLSSLPQLPGPKRKHTSLIIGVSVSGVVLALFAVLLGFYMYRRYKNADVIEAWELEIGPHRYSYQELKKATKGFKDKGLLGQGGFGSVYKGTLPNSNTQVAVKRISRDSKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDKYLFDEPERVLSWEQRFKVIKDVASALLYLHEGYEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYEHGANPSTTRVVGTLGYLAPEVPRTGKATPSSDVFAFGALLLEVACGLRPLEPKAMPEDLVLVDCVWNKYKQGRILDVVDPRLNGAFNEREMLMVLKLGLLCSNGSPTARPSMRQVMRFLDGEVGVPEELKRPGETASQEGFDEFLHLLESSSFDQMSRSSYDRSRYIGGSFPSYTNTSLFTPHAQGETI* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01052 686 CDD lectin_legume_LecRK_Arcelin_ConA 30 267 IPR001220 GO:0030246
Lapu10g01052 686 SUPERFAMILY Concanavalin A-like lectins/glucanases 14 270 IPR013320 -
Lapu10g01052 686 ProSitePatterns Protein kinases ATP-binding region signature. 352 375 IPR017441 GO:0005524
Lapu10g01052 686 ProSiteProfiles Protein kinase domain profile. 346 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01052 686 SMART serkin_6 346 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01052 686 FunFam L-type lectin-domain containing receptor kinase S.4 423 629 - -
Lapu10g01052 686 Gene3D Transferase(Phosphotransferase) domain 1 423 629 - -
Lapu10g01052 686 FunFam Lectin-domain containing receptor kinase A4.3 331 422 - -
Lapu10g01052 686 SUPERFAMILY Protein kinase-like (PK-like) 328 633 IPR011009 -
Lapu10g01052 686 PANTHER - 19 623 - -
Lapu10g01052 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Lapu10g01052 686 FunFam L-type lectin-domain containing receptor kinase S.4 24 271 - -
Lapu10g01052 686 Pfam Legume lectin domain 29 277 IPR001220 GO:0030246
Lapu10g01052 686 Pfam Protein kinase domain 347 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01052 686 Gene3D - 28 266 - -
Lapu10g01052 686 CDD STKc_IRAK 352 618 - -
Lapu10g01052 686 Gene3D Phosphorylase Kinase; domain 1 331 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01052 Lapu-Chr10 12370702 12372762 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01052 21 675 Receptor kinase-like Gene Family AT3G55550 58.445 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lapu10g01052 Pkinase 2.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01052 - - gmx:100801247 1155.58