Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01038 ATGTCTCTCCCAAGACCAAATAGTGAAGATAAAGCTCCTTCTCAGCTCAAAGAAGGAGTGGCACCACCATCAGCACCAGCACCAGCTTCATCCTCTTCTTCATGGAACAGGCTTCACACTTTCCCTCCTTTGAATCTACACAGCAAAATTGCTGATCCAGAAGACAGTGATGAAGATATGTTCACAGTTCCAGATGTGGAGACCACACCCATTAGTGTTCATTCTGCAGTGACTCTACAAAACAACAACAACCTTAGTCAACGTAATGTCACAGATAATCCTCAGTTTCAAACTGGTTTCCCTGGAAAACGTCGCAGGGGAAGAAACCCTGCAGATAAGGAACACAGACGTCTCAAGAGGTTGTTGCGAAATAGGGTTTCTGCTCAACAAGCCCGCGAAAGAAAGAAGGTTTATGTGAATGATTTGGAATCAAAAGCCAAAGAGTTGCAAGATAAAAACGCTATACTAGAAGAACGTATCTCTACTTTGATCAATGAGAACACCATGCTTAGGAAGGTTCTTATGAATGCGAGGCCAAAAGTTGATGACAGTAATGAACAAAAGCAAGAACAGCTAAGTAAGAGCTAA 588 0.4252 MSLPRPNSEDKAPSQLKEGVAPPSAPAPASSSSSWNRLHTFPPLNLHSKIADPEDSDEDMFTVPDVETTPISVHSAVTLQNNNNLSQRNVTDNPQFQTGFPGKRRRGRNPADKEHRRLKRLLRNRVSAQQARERKKVYVNDLESKAKELQDKNAILEERISTLINENTMLRKVLMNARPKVDDSNEQKQEQLSKS* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01038 195 SMART brlzneu 112 176 IPR004827 GO:0003700|GO:0006355
Lapu10g01038 195 Gene3D Single helix bin 135 176 - -
Lapu10g01038 195 CDD bZIP_HY5-like 126 167 - -
Lapu10g01038 195 FunFam Transcription factor HY5 135 176 - -
Lapu10g01038 195 MobiDBLite consensus disorder prediction 1 59 - -
Lapu10g01038 195 MobiDBLite consensus disorder prediction 82 98 - -
Lapu10g01038 195 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 114 177 IPR004827 GO:0003700|GO:0006355
Lapu10g01038 195 SUPERFAMILY Leucine zipper domain 116 175 IPR046347 GO:0003700|GO:0006355
Lapu10g01038 195 Pfam bZIP transcription factor 113 172 IPR004827 GO:0003700|GO:0006355
Lapu10g01038 195 Coils Coil 128 166 - -
Lapu10g01038 195 MobiDBLite consensus disorder prediction 82 115 - -
Lapu10g01038 195 MobiDBLite consensus disorder prediction 26 41 - -
Lapu10g01038 195 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 119 134 IPR004827 GO:0003700|GO:0006355
Lapu10g01038 195 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 22 190 IPR044280 GO:0000981|GO:0045944
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01038 Lapu-Chr10 12198000 12203704 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01038 95 183 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 75.556 7.13e-41 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu10g01038 bZIP_1 2.5e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01038 K16241 - gmx:778143 312.768