Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01037 ATGGACTTGAAGGTTGGCTTCTTTCTGTTTTGCAGTTTCTGTCTTGTCACTTTCTCCGAACAAGATGGTTTCTTGAGTCTTTCTTGTGGTGGAAGAACCAGTTTCACGGATTCATCTAACATTTCGTGGGTACCAGACACCACCTATGTAACCACAGGCAAGACTACCACCATCACTTACAATGATGGTTCCTCCTCACTGAACATCTCAGCCCGGTTCTTCCCAAATTCAGAAAGGCGAAAATGTTACAGAATACCAGCAAACAATTCAACGACTTTGGTTCTTGTTAGAGCAAAATTTGTGTACAAGAACTATGATGGACTTGGGAAACCCCCTAAGTTCTCTGTTTCAATTGGGACATCTATTGCTGCCACCATAAATCTTGCTGAAGATGATCCATGGAGTGAAGAGTTTCTATGGACAGTCAACATGGATACACTCTCATTTTGCTTAATTGCAATGCCTAAAGGGGGTTCACCTGTTATTTCTTCTCTTGAAATCAGACCACTTCCTCAGGGAGCCTACACAAATGGCATGACAGATTTTCCTAACAAGTTGCTTAGGAAGAGTTATAGAATTGATTGTGGACACTCAAATGATTCTATAAGGTATCCCTTGGATCCATTTGATAGAATATGGGATGCTGATAGAAGTTTCACACCCTTTCATGTTGCCATTGGGTTTAAGATTCAACTTAGCTTCAGACAGTCTAGTCTTGTAGAAGAACCACCACCAGCTGTTCTTCAAACTGGGAGAGTTTTGGCTCGAAGTAATACTCTGACATACAACCTCCGTCTTGATGCATTAGGGGACTACTACATCATCCTCTACTTTGCAGGAATTCTTCCTGTCTTCCCCTCATTTGATGTTCTTATAAATGGAGAACTAGTAAAATCAAACTACACGATAAATAGCTCTGAAACCACTGCTTTATACTTAACGCGAAAGGGAATTGGGAACTTGAATATAACATTAAAGAGTATCAGCTTTTACCCTCAGATCAATGCATTTGAGGTTTATAGTATGGTTGATATTCCAACTGATGCCTCCTCTACCACAGTTTCAGCACTACAGGTTATTCAACAGTCCACTGGATTGGATCTTGGATGGCAGGACGATCCATGTCTGCCTTCCCCATGGGAGAAAATTGACTGTGAAGGAAGCCTTGTTACATCATTGGATCTTTCAGACATAAATTTGAGATCCATTAGCCCTACATTTGGTGACTTGTTAGACCTCAAAATATTGGATTTGCACAACACATCGCTTACTGGTGAAATACAGAATTTGGATGGCTTGCAGCATCTTGAGAAACTGAACCTAAGTTTCAATCAGTTAACATCTATTGGTGCAGATCTTGAGAACTTGGTTAACCTTCAGATATTAGACTTGCAGAACAATAGTCTAATGGGATTAGTACCTGATAGCTTGGGAGAGTTAGAGGACCTTCACTTACTGAATCTGGAAAACAACAAACTACAAGGTCCTCTGCCGCAGTCTTTGAACAAAGAAACATTAGAGATCAGGACATCTGGTAATTTGTGTCTTACATTTTCCACAACATCATGTGATGATGCATCATCCATTCCTCCAATTGAGGCACCACAAGTTACTGTAGTTCCTCAGCAAAAGCATAATGTACATAACCATCTAGCAATAATACTAGGCATGGTTGGAGGAGCCACACTAGCCTTTCTATTAATGTGTATTTCAGTATTGTTATACAAGACCAAGCAACAATATGAAGCTTCCCACACATCAAGAGGAGAAATCGATATGAGGAACTGGGGTGCTGCAAAAGTATTTTCCTACAAAGAAATCAAAGTAGCTACAAGAAACTTCAAAGAAGTCATAGGAAAGGGTAGTTTTGGATCTGTTTATCTTGGAAAACTTCCAGATGGAAAATCTGTAGCTGTCAAAGTTCGGTTTGACAAATCTCAACTGGGTGCTGATTCTTTCATCAATGAGGTTAATATTTTATCAAAAATCAGGCATCAAAATCTTGTGACTTTGGAAGGATTTTGTCATGAAAGAAAGCATCAGATATTGGTTTATGAGTACTTGCCTGGTGGATCCCTGGCTGATCACCTCTATGGTACAAACAGTCAGAAGACTTCCTTAAGCTGGGTTCGAAGGTTGAAAATTGCTGTTGATGCAGCAAAAGGATTGGACTATTTGCACAATGGAAGTGAACCAAGAATCATACATCGTGATGTGAAGTGCAGTAACATCCTCTTCGATATGGATATGAATGGCAAGGTCTGTGACTTAGGTCTCTCTAAGCAAGTAACTCAAGCAGATGCAACTCATGTCACCACTGTTGTCAAGGGCACTGCTGGTTACCTTGATCCAGAGTACTATTCCACTCAACAGTTGACAGAGAAAAGTGATGTATATAGTTTTGGAGTTGTTCTTTTGGAACTCATTTGTGGAAGAGAGCCATTGACTCATTCTGGAACTCCTGATTCATTCAACTTGGTGTTATGGGCCAAGCCATACTTGCAGGCTGGTGCATTTGAGATTGTGGATGAAGACATAAGAGGAAGTTTTGATCCCTTGAGTATGAGAAAAGCAGCTTTCATTGCTATAAAGTCAGTGGAGAGGGATGCATCACAGAGGCCATCTATTGCAGAGGTATTGGCTGAGCTAAAGGAAGCCTACAATATTCAGCTCACATTCCTTGAATCTTGTCAAAATCAGAATTGA 2706 0.4035 MDLKVGFFLFCSFCLVTFSEQDGFLSLSCGGRTSFTDSSNISWVPDTTYVTTGKTTTITYNDGSSSLNISARFFPNSERRKCYRIPANNSTTLVLVRAKFVYKNYDGLGKPPKFSVSIGTSIAATINLAEDDPWSEEFLWTVNMDTLSFCLIAMPKGGSPVISSLEIRPLPQGAYTNGMTDFPNKLLRKSYRIDCGHSNDSIRYPLDPFDRIWDADRSFTPFHVAIGFKIQLSFRQSSLVEEPPPAVLQTGRVLARSNTLTYNLRLDALGDYYIILYFAGILPVFPSFDVLINGELVKSNYTINSSETTALYLTRKGIGNLNITLKSISFYPQINAFEVYSMVDIPTDASSTTVSALQVIQQSTGLDLGWQDDPCLPSPWEKIDCEGSLVTSLDLSDINLRSISPTFGDLLDLKILDLHNTSLTGEIQNLDGLQHLEKLNLSFNQLTSIGADLENLVNLQILDLQNNSLMGLVPDSLGELEDLHLLNLENNKLQGPLPQSLNKETLEIRTSGNLCLTFSTTSCDDASSIPPIEAPQVTVVPQQKHNVHNHLAIILGMVGGATLAFLLMCISVLLYKTKQQYEASHTSRGEIDMRNWGAAKVFSYKEIKVATRNFKEVIGKGSFGSVYLGKLPDGKSVAVKVRFDKSQLGADSFINEVNILSKIRHQNLVTLEGFCHERKHQILVYEYLPGGSLADHLYGTNSQKTSLSWVRRLKIAVDAAKGLDYLHNGSEPRIIHRDVKCSNILFDMDMNGKVCDLGLSKQVTQADATHVTTVVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVLLELICGREPLTHSGTPDSFNLVLWAKPYLQAGAFEIVDEDIRGSFDPLSMRKAAFIAIKSVERDASQRPSIAEVLAELKEAYNIQLTFLESCQNQN* 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01037 901 ProSiteProfiles Leucine-rich repeat profile. 435 457 IPR001611 GO:0005515
Lapu10g01037 901 CDD STKc_IRAK 618 885 - -
Lapu10g01037 901 SUPERFAMILY L domain-like 355 503 - -
Lapu10g01037 901 SUPERFAMILY Protein kinase-like (PK-like) 592 883 IPR011009 -
Lapu10g01037 901 Pfam Protein kinase domain 614 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01037 901 ProSitePatterns Protein kinases ATP-binding region signature. 618 640 IPR017441 GO:0005524
Lapu10g01037 901 Gene3D Ribonuclease Inhibitor 353 525 IPR032675 -
Lapu10g01037 901 SMART serkin_6 612 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01037 901 Pfam Leucine rich repeat 435 493 IPR001611 GO:0005515
Lapu10g01037 901 ProSiteProfiles Protein kinase domain profile. 612 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01037 901 FunFam serine/threonine-protein kinase PBS1-like 579 687 - -
Lapu10g01037 901 SMART LRR_typ_2 456 479 IPR003591 -
Lapu10g01037 901 SMART LRR_typ_2 433 455 IPR003591 -
Lapu10g01037 901 Gene3D Transferase(Phosphotransferase) domain 1 688 897 - -
Lapu10g01037 901 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 688 894 - -
Lapu10g01037 901 Gene3D Phosphorylase Kinase; domain 1 575 687 - -
Lapu10g01037 901 ProSitePatterns Serine/Threonine protein kinases active-site signature. 734 746 IPR008271 GO:0004672|GO:0006468
Lapu10g01037 901 Gene3D - 189 344 - -
Lapu10g01037 901 Pfam Malectin-like domain 27 342 IPR024788 -
Lapu10g01037 901 PANTHER OS07G0107800 PROTEIN-RELATED 448 887 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01037 Lapu-Chr10 12186470 12193568 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01037 7 896 Receptor kinase-like Gene Family AT5G48740 62.921 0.0 1118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lapu10g01037 Malectin_like 4.3e-55 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01037 - - gmx:100812804 1649.41