Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01033 ATGGGTTTTCCATCTAACATTAATCACTTTTTGATCTTTTTGCTCATGTTTTCTGGCTTCTGTTTAGATGTAATAAGCTCTGTGAATAATACCATCACATCAACCAGATTCATCAGGGACTCTCAGACTATAACCTCAAGCAACGGTGACTTCAAGCTTGGATTTTTCAGCCCTGAAAACTCCACACATCGCTATGTGGCAATCTGGTATCTCTCTCAAACCTATATCATATGGGTAGCAAATAGAGATCAACCACTGAATGATTCATCTGGGGTGTTCAAAATTCACAAGGATGGTAATCTTGTGCTACTGAATGGACAAAATAGTGTCGTATGGTCAACAAATACGTCAGTTGGTGCTACCAACTCTTCTGCCCAACTTGACAATTCAGGAAATCTGATCCTGCGTGATGACTCAAGTTTAACACCATTATGGGACAGTTTCACACACCCTGCTGATATTGCAGTGCCACAGATGAAAATTGCGACCAATAGGAACACTGGTGAGAAAATTGAGTATGTGTCGTGGAAAAGCAGTTCTGACCCTTCTTCTGGGTACTTCACTGGGAGCCTTGAACGGTTGGATGCTCCAGAAGTGTTTTTCTGGTACAACAAAACAAAGCCATATTGGAGAACTGGTCCATGGAATGGAAGAGTCTTCCTTGGGTCGCCAAGGATGTTAACTGAGTACCTATACGGGTGGCGTTTTGAGCCTAATGATAATGGAACTGCTTATCTAACCTACAATTTTGAAAAACCTGCCATGTTTGGAATCCTTACCATAACTCCACATGGCACACTGAAATTGGTAGAGTTTCTGAACAGAACTGCATTTCTTGAACTTGAGGTGGATCAAAATGAATGTGACTTTTACGGAAAGTGTGGGCCATTTGGAAGCTGTGATAACTCTACATTACCAATTTGCAGCTGTTTTGAGGGGTTTGAGCCAAGCAAGCCAGATGAATGGAACAGAAAAAAGTGGACTAGTGGGTGTGTGAGGAATGTGCCACTGAATTGTGGCAAGTTGAGAAATGAGAGTGAAGTTCAAGTAGATGGCTTTTCGGAGTACCATAATATGAAAGTTCCTGACTTTGCAGAGAGATCAGATGGAAACCAAGACAAATGTGCAGCAGATTGCTTGGCAAATTGCTCTTGCTTGGCATATGCATATGATTCTTATATTGGTTGCATGTATTGGAGTAGGGAGTTGATCGATTTGCAGAAATTTCCTTATGGAGGGGTTGATCTCTTCATCCGTGTGCCATCACAACTTCTACGAAGTGTGCCTCAAGATGTGATTACTGGAAACAGAAAGGAATTTACTAAATTGGAAGAGCTGCCACTTTTTAAATTTGAAAAGCTTGCAAATGCTACAAACAACTTTCACTTTGGTAATGTGCTTGGAAAGGGAGGTTTTGGTCCTGTTTACAAGGGACAATTGGAAAATGGACAAGAAATTGCTGTGAAAAGACTTTCAAAAACTTCTGGGCAAGGATTAGAAGAATTCATGAATGAAGTGGTAGTGATTTCTAAACTTCAGCATCGCAATCTAGTAAGACTTCTTGGATGTTGCATAGAAGGAGATGAACAAATGTTGGTATATGAGTTTATGCCAAACAAAAGTTTGGATTCATTTCTCTTTGATCCACTCCAAAGAAAAGTTTTAGATTGGAAAAAACGTTTCAACATAATAGAAGGAATAGCACGAGGAATATTGTATCTTCATAGAGATTCGAGACTAAGAATTATACATAGAGATCTTAAAGCAAGCAACATATTACTAGATGATGGTATGAATCCAAAGATATCAGATTTTGGTTTAGCTAGAATTGTTAGAGGAGGTGATGATGATCAAGCTAACACAAAAAGAGTTGTTGGAACTTATGGTTATATGCCGCCAGAATATGCAATGGAGGGACTTTTTTCAGAAAAGTCAGATGTGTATAGCTTTGGAGTGTTACTGCTAGAAATTGTAAGTGGACGAAGAAATACTAGCTTTCATAACGATGAACAATCACTCAGCCTTATTGGATTTGCATGGAGACTATGGAATGAAGGCAACATTATTACTATAATAGATCCAGAGATATGGGATCCAATGTTTGAAAAAAGTATGTTGAAGTGCATACACATAGGACTTCTATGTGTGCAAGAACTTACAAAAGAAAGGCCATCTATTTCAACTGTGGTTTTGATGCTTATTAGTGAGATTACACATCTTCCTCCTCCAAGGCAAGTTGCATTTGTTCAAAAACAAAATTGTCAAAGTTCAGAGTCTTCTCAAAAAAGTCAATTTAACTCAAACAATAATGTAACTATGAGCGAAATCCAAGGTAGATAA 2340 0.3868 MGFPSNINHFLIFLLMFSGFCLDVISSVNNTITSTRFIRDSQTITSSNGDFKLGFFSPENSTHRYVAIWYLSQTYIIWVANRDQPLNDSSGVFKIHKDGNLVLLNGQNSVVWSTNTSVGATNSSAQLDNSGNLILRDDSSLTPLWDSFTHPADIAVPQMKIATNRNTGEKIEYVSWKSSSDPSSGYFTGSLERLDAPEVFFWYNKTKPYWRTGPWNGRVFLGSPRMLTEYLYGWRFEPNDNGTAYLTYNFEKPAMFGILTITPHGTLKLVEFLNRTAFLELEVDQNECDFYGKCGPFGSCDNSTLPICSCFEGFEPSKPDEWNRKKWTSGCVRNVPLNCGKLRNESEVQVDGFSEYHNMKVPDFAERSDGNQDKCAADCLANCSCLAYAYDSYIGCMYWSRELIDLQKFPYGGVDLFIRVPSQLLRSVPQDVITGNRKEFTKLEELPLFKFEKLANATNNFHFGNVLGKGGFGPVYKGQLENGQEIAVKRLSKTSGQGLEEFMNEVVVISKLQHRNLVRLLGCCIEGDEQMLVYEFMPNKSLDSFLFDPLQRKVLDWKKRFNIIEGIARGILYLHRDSRLRIIHRDLKASNILLDDGMNPKISDFGLARIVRGGDDDQANTKRVVGTYGYMPPEYAMEGLFSEKSDVYSFGVLLLEIVSGRRNTSFHNDEQSLSLIGFAWRLWNEGNIITIIDPEIWDPMFEKSMLKCIHIGLLCVQELTKERPSISTVVLMLISEITHLPPPRQVAFVQKQNCQSSESSQKSQFNSNNNVTMSEIQGR* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01033 779 PIRSF SRK 4 438 IPR024171 GO:0004674
Lapu10g01033 779 PIRSF SRK 426 779 IPR024171 GO:0004674
Lapu10g01033 779 SMART serkin_6 461 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01033 779 Pfam PAN-like domain 349 406 IPR003609 -
Lapu10g01033 779 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 148 - -
Lapu10g01033 779 ProSiteProfiles Bulb-type lectin domain profile. 29 148 IPR001480 -
Lapu10g01033 779 Gene3D - 23 150 IPR036426 -
Lapu10g01033 779 SMART blect_4 35 151 IPR001480 -
Lapu10g01033 779 ProSitePatterns Serine/Threonine protein kinases active-site signature. 582 594 IPR008271 GO:0004672|GO:0006468
Lapu10g01033 779 Gene3D Transferase(Phosphotransferase) domain 1 537 741 - -
Lapu10g01033 779 ProSiteProfiles PAN/Apple domain profile. 339 421 IPR003609 -
Lapu10g01033 779 ProSiteProfiles Protein kinase domain profile. 461 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g01033 779 Pfam S-locus glycoprotein domain 210 317 IPR000858 GO:0048544
Lapu10g01033 779 SUPERFAMILY Protein kinase-like (PK-like) 446 754 IPR011009 -
Lapu10g01033 779 CDD STKc_IRAK 467 733 - -
Lapu10g01033 779 CDD B_lectin 35 151 IPR001480 -
Lapu10g01033 779 Pfam D-mannose binding lectin 76 177 IPR001480 -
Lapu10g01033 779 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 182 IPR036426 -
Lapu10g01033 779 SMART ntp_6 348 420 IPR003609 -
Lapu10g01033 779 MobiDBLite consensus disorder prediction 757 779 - -
Lapu10g01033 779 Gene3D Phosphorylase Kinase; domain 1 435 536 - -
Lapu10g01033 779 Pfam Protein tyrosine and serine/threonine kinase 462 672 IPR001245 GO:0004672|GO:0006468
Lapu10g01033 779 ProSiteProfiles EGF-like domain profile. 284 320 IPR000742 -
Lapu10g01033 779 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 537 741 - -
Lapu10g01033 779 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 725 - -
Lapu10g01033 779 CDD PAN_AP_plant 335 421 - -
Lapu10g01033 779 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 428 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01033 Lapu-Chr10 12157253 12162386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01033 449 779 Receptor kinase-like Gene Family AT4G11530 56.213 2.59e-126 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu10g01033 PK_Tyr_Ser-Thr 8.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01033 - - gmx:100786846 1336.63