Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01018 ATGAAGACATCAGTGAGTAATCATAAAATGGAGTTAAGTAGGGTTTGGATGATTGGTGTGAGTTTGTTGGGATGTTATGTTTTTGTGAAGAAAATAATGAGAAAGTTGAATGGGTGGTACTATGATATGAAATTAGGAAACAAACATGGCCTATTGCCTCCTGGTGATATGGGATGGCCTCTTATTGGATATCTCATTCCCTTCTTGAGAGATTTCTCCTCTGGTCATCCTGATTCATTCATCAATCACTTTGTCTCCAAATATGGAGAAGGTGGAATGTACAAGACTCATTTGTTGGGAAAGCCAAGCATCATCATCTGCACCGCTGAGATGTGCAAGAGAGTGTTGAGTGATGATAAGAACTTCATGCATGGGTATCCAAAATCCACAAGAGAGTTGTTGAATACTGGGGCTTTGTCTACTACGGGCACTCCCGAACACAAGGGTTTCCGACAGTTGGTGACTTCTGGAATTTTGGGTGTGAAAATGTTGGGAATGAACCTAGAACTTGTGGAGAAGATTGTGATTGATTCATTGGAAGAGTTATCCAGCATAAAGCACCCAGTTCAGATCTTCAAAGAGATGGAAAAGCTTTCCTTTGAAGCCCTTGTTCACATCATCTTGGGTTCTCACACTCATTCCAACGTTGCAAAGTTAAGAGACTTGTTTAGCCAATTCTCTGAATGCAATCCCATATATTCTGTTCCCATTGACTTACCTGGTTTTGCTTTCCATAAAGGACTCCAGATACGAAAGAAGATTTTGAAAGTAATTGTATCCATTGTGGGTGAAAGGAGGTTGAAGATGAAACAGGTTAAAAATGGAGATAAGAAAGATCTGATAGACCTTGTTATGGAATTCAAAGGGGAGAATGGTGATGAATTGAAGGACAAAGATGTTGCAGATATGTTGGTAATGCTTCTCTTTGCTGGTCATGAAACCTCAGCAGTGGCTTTGACAACCTCAATTATATATCTCACACAACATCCACAAGTTTTCAGAAAAGCCAAGGAAGAGCAAGAAGAAATTGTGAAGGCAAGACCATCATCTCAGAAACAATTAACTAATAAGGAAATTAAGCAAATGGTTTATCTTTCCCAGGTAATTAATGAAACGTTACGTCGTACCAATATTGCATTTTCACTTTTTCGGGAGGCAACTAACGACGTCGTAATGAATGATTATATGATACCAAAAGGGTGGAGAGTTCTAGTTTGGTTAAGAGCTATTCATATGGATCCTCAATATTATCCAAATCCAGATGCATTTGATCCATCAAGATGGGATGACAAAAATGCTAGGGCTGCACCCTTCCTTCCTTTTGGAACAGGAACTAGGCTTTGTCCAGGAAATCACATATTCAAATTCGAAATTTCCATATTTTTACACTATTTTCTCCTAAATTACAAGTTGGAGCAAGTAAGTTCAGGAGGTCCTGAAGCTATCTTCCCATTCTCTCACCCAAAAGACTTAGCTAAGGTGGTGAAGGTCTCTGGATTAGCTAATTGA 1509 0.3917 MKTSVSNHKMELSRVWMIGVSLLGCYVFVKKIMRKLNGWYYDMKLGNKHGLLPPGDMGWPLIGYLIPFLRDFSSGHPDSFINHFVSKYGEGGMYKTHLLGKPSIIICTAEMCKRVLSDDKNFMHGYPKSTRELLNTGALSTTGTPEHKGFRQLVTSGILGVKMLGMNLELVEKIVIDSLEELSSIKHPVQIFKEMEKLSFEALVHIILGSHTHSNVAKLRDLFSQFSECNPIYSVPIDLPGFAFHKGLQIRKKILKVIVSIVGERRLKMKQVKNGDKKDLIDLVMEFKGENGDELKDKDVADMLVMLLFAGHETSAVALTTSIIYLTQHPQVFRKAKEEQEEIVKARPSSQKQLTNKEIKQMVYLSQVINETLRRTNIAFSLFREATNDVVMNDYMIPKGWRVLVWLRAIHMDPQYYPNPDAFDPSRWDDKNARAAPFLPFGTGTRLCPGNHIFKFEISIFLHYFLLNYKLEQVSSGGPEAIFPFSHPKDLAKVVKVSGLAN* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01018 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Lapu10g01018 502 SUPERFAMILY Cytochrome P450 52 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01018 502 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01018 502 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01018 502 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01018 502 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01018 502 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01018 502 Gene3D Cytochrome P450 44 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01018 502 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Lapu10g01018 502 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01018 502 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01018 502 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01018 502 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01018 502 Pfam Cytochrome P450 53 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01018 502 PANTHER CYTOCHROME P450 26 50 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01018 Lapu-Chr10 11987642 11995757 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01018 22 497 Cytochrome P450 AT2G32440 42.050 3.78e-142 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01018 K04123 K17875 vra:106773832 761.525